Gene
RNA
| Item | Value |
|---|---|
| gene id | G785182 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 24653558 ~ 24653869 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DENN domain-containing protein 4C-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU894236 | True | 214 | lncRNA | 0.61 | 2 | 24653558 | 24653869 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531785 | plap | coding | upstream | 29262 | 24601334 ~ 24624296 (+) |
| LOC110531781 | LOC106577736 | coding | upstream | 169100 | 24456658 ~ 24484458 (+) |
| LOC110531780 | bank1 | coding | upstream | 249951 | 24369829 ~ 24403607 (+) |
| mllt3 | LOC106577592 | coding | upstream | 455814 | 24149046 ~ 24197744 (+) |
| hacd4 | hacd4 | coding | upstream | 566218 | 24077880 ~ 24087340 (+) |
| LOC110531793 | LOC106577583 | coding | downstream | 66156 | 24720025 ~ 24726878 (+) |
| LOC110531798 | LOC106577580 | coding | downstream | 81796 | 24735665 ~ 24770025 (+) |
| LOC110531796 | LOC106577576 | coding | downstream | 126998 | 24780867 ~ 24783674 (+) |
| LOC110531804 | NA | coding | downstream | 140744 | 24794613 ~ 24795514 (+) |
| LOC118966018 | NA | coding | downstream | 141784 | 24795653 ~ 24800154 (+) |
| G785033 | NA | non-coding | upstream | 168009 | 24485101 ~ 24485549 (+) |
| G785046 | NA | non-coding | upstream | 177494 | 24475761 ~ 24476064 (+) |
| G785026 | NA | non-coding | upstream | 201486 | 24451800 ~ 24452072 (+) |
| G785021 | NA | non-coding | upstream | 206406 | 24446865 ~ 24447152 (+) |
| G784995 | NA | non-coding | upstream | 221368 | 24431955 ~ 24432190 (+) |
| G785196 | LOC100380740 | non-coding | downstream | 51581 | 24705450 ~ 24771803 (+) |
| G785198 | LOC100380740 | non-coding | downstream | 119894 | 24773763 ~ 24818004 (+) |
| G785262 | NA | non-coding | downstream | 155845 | 24809714 ~ 24810262 (+) |
| G785404 | NA | non-coding | downstream | 170748 | 24824617 ~ 24824840 (+) |
| G785410 | NA | non-coding | downstream | 174015 | 24827884 ~ 24828109 (+) |
| G785138 | NA | other | upstream | 70681 | 24582387 ~ 24582877 (+) |
| LOC110531763 | LOC106577738 | other | upstream | 814444 | 23834071 ~ 23839257 (+) |
| LOC110531761 | LOC106577604 | other | upstream | 849421 | 23802151 ~ 23804811 (+) |
| LOC110531760 | LOC106577603 | other | upstream | 874057 | 23765275 ~ 23780276 (+) |
| LOC110531788 | LOC106577570 | other | downstream | 276482 | 24872772 ~ 24952098 (+) |
| LOC110531825 | LOC106577732 | other | downstream | 873804 | 25525371 ~ 25532692 (+) |
| G786091 | NA | other | downstream | 891362 | 25545231 ~ 25546967 (+) |
| G785962 | LOC105020693 | other | downstream | 1059128 | 25712997 ~ 25742909 (+) |
| G786218 | NA | other | downstream | 1304215 | 25874527 ~ 25958867 (+) |
