Gene
RNA
| Item | Value |
|---|---|
| gene id | G785196 |
| gene name | LOC100380740 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 24705450 ~ 24771803 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| perilipin-2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU894255 | True | 723 | lncRNA | 0.49 | 2 | 24705450 | 24771803 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531785 | plap | coding | upstream | 81154 | 24601334 ~ 24624296 (+) |
| LOC110531781 | LOC106577736 | coding | upstream | 220992 | 24456658 ~ 24484458 (+) |
| LOC110531780 | bank1 | coding | upstream | 301843 | 24369829 ~ 24403607 (+) |
| mllt3 | LOC106577592 | coding | upstream | 507706 | 24149046 ~ 24197744 (+) |
| hacd4 | hacd4 | coding | upstream | 618110 | 24077880 ~ 24087340 (+) |
| LOC110531796 | LOC106577576 | coding | downstream | 9064 | 24780867 ~ 24783674 (+) |
| LOC110531804 | NA | coding | downstream | 22810 | 24794613 ~ 24795514 (+) |
| LOC118966018 | NA | coding | downstream | 23850 | 24795653 ~ 24800154 (+) |
| LOC110531795 | LOC106577574 | coding | downstream | 53496 | 24825299 ~ 24845982 (+) |
| si:ch211-119e14.1 | LOC106577735 | coding | downstream | 75855 | 24847658 ~ 24851652 (+) |
| G785182 | NA | non-coding | upstream | 51581 | 24653558 ~ 24653869 (+) |
| G785033 | NA | non-coding | upstream | 219901 | 24485101 ~ 24485549 (+) |
| G785046 | NA | non-coding | upstream | 229386 | 24475761 ~ 24476064 (+) |
| G785026 | NA | non-coding | upstream | 253378 | 24451800 ~ 24452072 (+) |
| G785021 | NA | non-coding | upstream | 258298 | 24446865 ~ 24447152 (+) |
| G785198 | LOC100380740 | non-coding | downstream | 1960 | 24773763 ~ 24818004 (+) |
| G785262 | NA | non-coding | downstream | 37911 | 24809714 ~ 24810262 (+) |
| G785404 | NA | non-coding | downstream | 52814 | 24824617 ~ 24824840 (+) |
| G785410 | NA | non-coding | downstream | 56081 | 24827884 ~ 24828109 (+) |
| G785433 | NA | non-coding | downstream | 126356 | 24898159 ~ 25000005 (+) |
| G785138 | NA | other | upstream | 122573 | 24582387 ~ 24582877 (+) |
| LOC110531763 | LOC106577738 | other | upstream | 866336 | 23834071 ~ 23839257 (+) |
| LOC110531761 | LOC106577604 | other | upstream | 901313 | 23802151 ~ 23804811 (+) |
| LOC110531760 | LOC106577603 | other | upstream | 925949 | 23765275 ~ 23780276 (+) |
| LOC110531788 | LOC106577570 | other | downstream | 158548 | 24872772 ~ 24952098 (+) |
| LOC110531825 | LOC106577732 | other | downstream | 755870 | 25525371 ~ 25532692 (+) |
| G786091 | NA | other | downstream | 773428 | 25545231 ~ 25546967 (+) |
| G785962 | LOC105020693 | other | downstream | 941194 | 25712997 ~ 25742909 (+) |
| G786218 | NA | other | downstream | 1186281 | 25874527 ~ 25958867 (+) |
