G785410


Basic Information

Item Value
gene id G785410
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24827884 ~ 24828109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU894508
gattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcgagggggccgaatactttcgcaaggcactgtatatatatatagaaatcgGACAATTAATcgttatcggctttttttggtcctccaataatcggtattggagTTTATATGGAATGTGCGACTCTATTGTGAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU894508 True 226 lncRNA 0.37 1 24827884 24828109

Neighbor

gene id symbol gene type direction distance location
LOC118966018 NA coding upstream 27730 24795653 ~ 24800154 (+)
LOC110531804 NA coding upstream 32370 24794613 ~ 24795514 (+)
LOC110531796 LOC106577576 coding upstream 44210 24780867 ~ 24783674 (+)
LOC110531798 LOC106577580 coding upstream 57859 24735665 ~ 24770025 (+)
LOC110531793 LOC106577583 coding upstream 101006 24720025 ~ 24726878 (+)
si:ch211-119e14.1 LOC106577735 coding downstream 19549 24847658 ~ 24851652 (+)
trnaa-cgc NA coding downstream 23699 24851808 ~ 24851879 (+)
dtx4a LOC103369650 coding downstream 24037 24852146 ~ 24866684 (+)
LOC110531800 LOC106577573 coding downstream 40982 24869091 ~ 24871866 (+)
LOC110531788 LOC106577570 coding downstream 44663 24872772 ~ 24952098 (+)
G785404 NA non-coding upstream 3044 24824617 ~ 24824840 (+)
G785198 LOC100380740 non-coding upstream 9880 24773763 ~ 24818004 (+)
G785262 NA non-coding upstream 17622 24809714 ~ 24810262 (+)
G785196 LOC100380740 non-coding upstream 56081 24705450 ~ 24771803 (+)
G785182 NA non-coding upstream 174015 24653558 ~ 24653869 (+)
G785433 NA non-coding downstream 70050 24898159 ~ 25000005 (+)
G785638 NA non-coding downstream 217315 25045424 ~ 25061013 (+)
G785695 NA non-coding downstream 309734 25137843 ~ 25143127 (+)
G785793 NA non-coding downstream 331203 25159312 ~ 25164194 (+)
G785825 NA non-coding downstream 354341 25182450 ~ 25182725 (+)
G785138 NA other upstream 245007 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 740558 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 988770 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1023747 23802151 ~ 23804811 (+)
LOC110531760 LOC106577603 other upstream 1048383 23765275 ~ 23780276 (+)
LOC110531825 LOC106577732 other downstream 699564 25525371 ~ 25532692 (+)
G786091 NA other downstream 717122 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 884888 25712997 ~ 25742909 (+)
G786218 NA other downstream 1129975 25874527 ~ 25958867 (+)

Expression


Co-expression Network