G785433


Basic Information

Item Value
gene id G785433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24898159 ~ 25000005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU894537
aagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttggaaaatctttttgtatccaaatccggctttaaacttctttacaacagtatctcggacctgcctggtgtgtttcttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttagggcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgaacgctaaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU894537 True 550 lncRNA 0.39 2 24898159 25000005

Neighbor

gene id symbol gene type direction distance location
LOC110531800 LOC106577573 coding upstream 26293 24869091 ~ 24871866 (+)
dtx4a LOC103369650 coding upstream 31475 24852146 ~ 24866684 (+)
trnaa-cgc NA coding upstream 46280 24851808 ~ 24851879 (+)
si:ch211-119e14.1 LOC106577735 coding upstream 46507 24847658 ~ 24851652 (+)
LOC110531795 LOC106577574 coding upstream 52177 24825299 ~ 24845982 (+)
trnaa-ugc-31 NA coding downstream 26566 25026571 ~ 25026641 (+)
LOC110531806 LOC106577568 coding downstream 103848 25103853 ~ 25108225 (+)
LOC110531807 hmx1 coding downstream 194776 25194781 ~ 25197585 (+)
LOC118966019 LOC106577563 coding downstream 315357 25315362 ~ 25324106 (+)
LOC110531811 LOC106577563 coding downstream 323994 25323999 ~ 25339758 (+)
G785410 NA non-coding upstream 70050 24827884 ~ 24828109 (+)
G785404 NA non-coding upstream 73319 24824617 ~ 24824840 (+)
G785198 LOC100380740 non-coding upstream 80155 24773763 ~ 24818004 (+)
G785262 NA non-coding upstream 87897 24809714 ~ 24810262 (+)
G785196 LOC100380740 non-coding upstream 126356 24705450 ~ 24771803 (+)
G785638 NA non-coding downstream 45419 25045424 ~ 25061013 (+)
G785695 NA non-coding downstream 137838 25137843 ~ 25143127 (+)
G785793 NA non-coding downstream 159307 25159312 ~ 25164194 (+)
G785825 NA non-coding downstream 182445 25182450 ~ 25182725 (+)
G785851 NA non-coding downstream 203083 25203088 ~ 25203310 (+)
G785138 NA other upstream 315282 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 810833 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 1059045 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1094022 23802151 ~ 23804811 (+)
LOC110531760 LOC106577603 other upstream 1118658 23765275 ~ 23780276 (+)
LOC110531825 LOC106577732 other downstream 527668 25525371 ~ 25532692 (+)
G786091 NA other downstream 545226 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 712992 25712997 ~ 25742909 (+)
G786218 NA other downstream 958079 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 1413107 26413112 ~ 26413532 (+)

Expression


Co-expression Network