G785695


Basic Information

Item Value
gene id G785695
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25137843 ~ 25143127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU894857
cagatatgcatctgttggtcacagttacctttaaaaaaaaaagtaggggtgtggatcagaaaaccagtcagtatctggtgttacCACCATTTGACTCTTGCAGTATGGCACatctccttcgcatagagttaatcagactgttgattgtggcctgtggaatgttgtcccactcctcttcaattgctGAGTGAAGTTGTTGGATTTTGGCCAGAACTGGAACACTCTGTTGTATACGTTGATCCAGACc

Function

NR:

description
Transposable element Tcb1 transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU894857 True 247 lncRNA 0.43 2 25137843 25143127

Neighbor

gene id symbol gene type direction distance location
LOC110531806 LOC106577568 coding upstream 29618 25103853 ~ 25108225 (+)
trnaa-ugc-31 NA coding upstream 111202 25026571 ~ 25026641 (+)
LOC110532977 LOC106577569 coding upstream 120398 24971751 ~ 25017445 (+)
LOC110531794 LOC106577572 coding upstream 166383 24952826 ~ 24971460 (+)
LOC110531788 LOC106577570 coding upstream 185745 24872772 ~ 24952098 (+)
LOC110531807 hmx1 coding downstream 51654 25194781 ~ 25197585 (+)
LOC118966019 LOC106577563 coding downstream 172235 25315362 ~ 25324106 (+)
LOC110531811 LOC106577563 coding downstream 180872 25323999 ~ 25339758 (+)
LOC110531816 NA coding downstream 224238 25367365 ~ 25369664 (+)
LOC110533008 NA coding downstream 253152 25396279 ~ 25397954 (+)
G785638 NA non-coding upstream 76830 25045424 ~ 25061013 (+)
G785433 NA non-coding upstream 137838 24898159 ~ 25000005 (+)
G785410 NA non-coding upstream 309734 24827884 ~ 24828109 (+)
G785404 NA non-coding upstream 313003 24824617 ~ 24824840 (+)
G785198 LOC100380740 non-coding upstream 319839 24773763 ~ 24818004 (+)
G785793 NA non-coding downstream 16185 25159312 ~ 25164194 (+)
G785825 NA non-coding downstream 39323 25182450 ~ 25182725 (+)
G785851 NA non-coding downstream 59961 25203088 ~ 25203310 (+)
G785886 NA non-coding downstream 84690 25227817 ~ 25228103 (+)
G785930 NA non-coding downstream 126297 25269424 ~ 25269834 (+)
G785138 NA other upstream 554966 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 1050517 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 1298729 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1333706 23802151 ~ 23804811 (+)
LOC110531825 LOC106577732 other downstream 384546 25525371 ~ 25532692 (+)
G786091 NA other downstream 402104 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 569870 25712997 ~ 25742909 (+)
G786218 NA other downstream 814957 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 1269985 26413112 ~ 26413532 (+)

Expression


Co-expression Network