Gene
RNA
| Item | Value |
|---|---|
| gene id | G785791 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 25157901 ~ 25158133 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: aspartate aminotransferase, cytoplasmic-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU894956 | True | 233 | lncRNA | 0.47 | 1 | 25157901 | 25158133 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532976 | LOC106577575 | coding | downstream | 338477 | 24803312 ~ 24819424 (-) |
| LOC110531801 | LOC106577577 | coding | downstream | 365709 | 24783891 ~ 24792192 (-) |
| LOC110531797 | LOC100380740 | coding | downstream | 380547 | 24770432 ~ 24777354 (-) |
| LOC110531803 | NA | coding | downstream | 398122 | 24752037 ~ 24759779 (-) |
| LOC118966243 | NA | coding | downstream | 444130 | 24713641 ~ 24713771 (-) |
| LOC110531808 | cpz | coding | upstream | 86064 | 25244197 ~ 25262199 (-) |
| LOC110531809 | gpr78 | coding | upstream | 104632 | 25262765 ~ 25267286 (-) |
| trmt44 | trmt44 | coding | upstream | 135905 | 25294038 ~ 25309252 (-) |
| LOC110531812 | LOC106577560 | coding | upstream | 180448 | 25338581 ~ 25365749 (-) |
| LOC110531813 | LOC106577559 | coding | upstream | 210059 | 25368192 ~ 25377186 (-) |
| G785776 | NA | non-coding | downstream | 14892 | 25137655 ~ 25143009 (-) |
| G785741 | NA | non-coding | downstream | 85810 | 25068596 ~ 25072091 (-) |
| G785584 | NA | non-coding | downstream | 186476 | 24970210 ~ 24971425 (-) |
| G785575 | LOC106577572 | non-coding | downstream | 191149 | 24960183 ~ 24966752 (-) |
| G785558 | NA | non-coding | downstream | 213641 | 24938913 ~ 24944260 (-) |
| G785804 | NA | non-coding | upstream | 12719 | 25170852 ~ 25171077 (-) |
| G785838 | NA | non-coding | upstream | 32275 | 25190408 ~ 25190685 (-) |
| G785839 | NA | non-coding | upstream | 33787 | 25191920 ~ 25192164 (-) |
| G785849 | NA | non-coding | upstream | 44030 | 25202163 ~ 25202378 (-) |
| G785867 | NA | non-coding | upstream | 54239 | 25212372 ~ 25212574 (-) |
| G785578 | NA | other | downstream | 192627 | 24963072 ~ 24965274 (-) |
| G785329 | plap | other | downstream | 538848 | 24605485 ~ 24619053 (-) |
| LOC110531775 | LOC107706756 | other | downstream | 949246 | 24206453 ~ 24208980 (-) |
| frem1a | frem1 | other | downstream | 1310471 | 23845242 ~ 23876940 (-) |
| G784651 | NA | other | downstream | 1349629 | 23806558 ~ 23808272 (-) |
| G787211 | NA | other | upstream | 132782 | 25290915 ~ 25291471 (-) |
| G787386 | NA | other | upstream | 363905 | 25522038 ~ 25619623 (-) |
| G787350 | NA | other | upstream | 717302 | 25875435 ~ 25894404 (-) |
