G785870


Basic Information

Item Value
gene id G785870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25212729 ~ 25213354 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895039
ctcccgTAAAGCCCAGACTAGTGAAGTGCTtttagagactgttgtccttctggcaggttctcccgtctcagccaaggaactctgtagttctgtcagagttgtcattgggttcttggtcacctccatgaccaaggcccttcttgcccggttgctcagtttggtcggatggccagctctaggcagagtctgggtactTCCATATTTCTTCCATTTCCCAATTATGGAGATcatgtgctcttggaaacttccAACACTCTAGAAATAGTTTTACACCTTTCCCCAGATATAAagtatgcctcatcacaattctatctcgGAGGTTCCTTGAACTTCATGTTTTAgtctctgctctgacatgcactgtcaactgtgggaccttatatagacagatgtgtttctttctaaatcatgtccaaacaatcgaattggccacaggtggactccaatgatctcaaggatgatcaaaggaaattggatgcacctgagctcaatttggagtgtcatagcaaaagCGGTGTGAAtacctacactaccggtcaaaagttttagaacacctactcattcaagggtttttcttcattttaactattgtctacattgtatagtaatagtgaagacatcaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895039 True 626 lncRNA 0.43 1 25212729 25213354

Neighbor

gene id symbol gene type direction distance location
LOC110532976 LOC106577575 coding downstream 393305 24803312 ~ 24819424 (-)
LOC110531801 LOC106577577 coding downstream 420537 24783891 ~ 24792192 (-)
LOC110531797 LOC100380740 coding downstream 435375 24770432 ~ 24777354 (-)
LOC110531803 NA coding downstream 452950 24752037 ~ 24759779 (-)
LOC118966243 NA coding downstream 498958 24713641 ~ 24713771 (-)
LOC110531808 cpz coding upstream 30843 25244197 ~ 25262199 (-)
LOC110531809 gpr78 coding upstream 49411 25262765 ~ 25267286 (-)
trmt44 trmt44 coding upstream 80684 25294038 ~ 25309252 (-)
LOC110531812 LOC106577560 coding upstream 125227 25338581 ~ 25365749 (-)
LOC110531813 LOC106577559 coding upstream 154838 25368192 ~ 25377186 (-)
G785867 NA non-coding downstream 155 25212372 ~ 25212574 (-)
G785849 NA non-coding downstream 10351 25202163 ~ 25202378 (-)
G785839 NA non-coding downstream 20565 25191920 ~ 25192164 (-)
G785838 NA non-coding downstream 22044 25190408 ~ 25190685 (-)
G785804 NA non-coding downstream 41652 25170852 ~ 25171077 (-)
G785871 NA non-coding upstream 1661 25215015 ~ 25215233 (-)
G785894 NA non-coding upstream 17912 25231266 ~ 25231511 (-)
G787190 NA non-coding upstream 55941 25269295 ~ 25269648 (-)
G787203 NA non-coding upstream 70738 25284092 ~ 25284372 (-)
G787219 NA non-coding upstream 86685 25300039 ~ 25310864 (-)
G785578 NA other downstream 247455 24963072 ~ 24965274 (-)
G785329 plap other downstream 593676 24605485 ~ 24619053 (-)
LOC110531775 LOC107706756 other downstream 1004074 24206453 ~ 24208980 (-)
frem1a frem1 other downstream 1365299 23845242 ~ 23876940 (-)
G784651 NA other downstream 1404457 23806558 ~ 23808272 (-)
G787211 NA other upstream 77561 25290915 ~ 25291471 (-)
G787386 NA other upstream 308684 25522038 ~ 25619623 (-)
G787350 NA other upstream 662081 25875435 ~ 25894404 (-)

Expression


Co-expression Network