G785886


Basic Information

Item Value
gene id G785886
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25227817 ~ 25228103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895055
ggaccaaaacgcagcgtggtaactgtccataatgtttaataaaaacaacagaacactggaacaaaacaaaataatgtgcatcaacgaaacagtcccgtgtggcgacaaacactgacacggaagacaaacacccacgaaacacaggtggaaaaaaggctacctaagtatgattctcaatcagagacaactaacgacacctgcctctgattgagaaccatactaggccgaacacagaaaccaacatagaaaaacaaacatagactgcccaccccaactcacgccctgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895055 True 287 lncRNA 0.44 1 25227817 25228103

Neighbor

gene id symbol gene type direction distance location
LOC110531807 hmx1 coding upstream 30232 25194781 ~ 25197585 (+)
LOC110531806 LOC106577568 coding upstream 119592 25103853 ~ 25108225 (+)
trnaa-ugc-31 NA coding upstream 201176 25026571 ~ 25026641 (+)
LOC110532977 LOC106577569 coding upstream 210372 24971751 ~ 25017445 (+)
LOC110531794 LOC106577572 coding upstream 256357 24952826 ~ 24971460 (+)
LOC118966019 LOC106577563 coding downstream 87259 25315362 ~ 25324106 (+)
LOC110531811 LOC106577563 coding downstream 95896 25323999 ~ 25339758 (+)
LOC110531816 NA coding downstream 139262 25367365 ~ 25369664 (+)
LOC110533008 NA coding downstream 168176 25396279 ~ 25397954 (+)
LOC110531817 LOC106577558 coding downstream 171406 25399509 ~ 25410386 (+)
G785851 NA non-coding upstream 24507 25203088 ~ 25203310 (+)
G785825 NA non-coding upstream 45092 25182450 ~ 25182725 (+)
G785793 NA non-coding upstream 63623 25159312 ~ 25164194 (+)
G785695 NA non-coding upstream 84690 25137843 ~ 25143127 (+)
G785638 NA non-coding upstream 166804 25045424 ~ 25061013 (+)
G785930 NA non-coding downstream 41321 25269424 ~ 25269834 (+)
G785934 NA non-coding downstream 47302 25275405 ~ 25275691 (+)
G785940 NA non-coding downstream 55663 25283766 ~ 25284033 (+)
G785949 NA non-coding downstream 64430 25292533 ~ 25292819 (+)
G785950 trmt44 non-coding downstream 65961 25294064 ~ 25295094 (+)
LOC110531788 LOC106577570 other upstream 275721 24872772 ~ 24952098 (+)
G785138 NA other upstream 644940 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 1140491 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 1388703 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1423680 23802151 ~ 23804811 (+)
LOC110531825 LOC106577732 other downstream 299570 25525371 ~ 25532692 (+)
G786091 NA other downstream 317128 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 484894 25712997 ~ 25742909 (+)
G786218 NA other downstream 729981 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 1185009 26413112 ~ 26413532 (+)

Expression


Co-expression Network