G785930


Basic Information

Item Value
gene id G785930
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25269424 ~ 25269834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895100
cacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgggactatcacagtgcaggtgcatttatacagagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagta
>TU895102
cacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgggactatcacagtgcaggtgcatttatacagagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaatcattttgcacggccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatatcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatgcagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaaggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895100 False 221 lncRNA 0.43 1 25269424 25269644
TU895102 True 411 lncRNA 0.39 1 25269424 25269834

Neighbor

gene id symbol gene type direction distance location
LOC110531807 hmx1 coding upstream 71839 25194781 ~ 25197585 (+)
LOC110531806 LOC106577568 coding upstream 161199 25103853 ~ 25108225 (+)
trnaa-ugc-31 NA coding upstream 242783 25026571 ~ 25026641 (+)
LOC110532977 LOC106577569 coding upstream 251979 24971751 ~ 25017445 (+)
LOC110531794 LOC106577572 coding upstream 297964 24952826 ~ 24971460 (+)
LOC118966019 LOC106577563 coding downstream 45528 25315362 ~ 25324106 (+)
LOC110531811 LOC106577563 coding downstream 54165 25323999 ~ 25339758 (+)
LOC110531816 NA coding downstream 97531 25367365 ~ 25369664 (+)
LOC110533008 NA coding downstream 126445 25396279 ~ 25397954 (+)
LOC110531817 LOC106577558 coding downstream 129675 25399509 ~ 25410386 (+)
G785886 NA non-coding upstream 41321 25227817 ~ 25228103 (+)
G785851 NA non-coding upstream 66114 25203088 ~ 25203310 (+)
G785825 NA non-coding upstream 86699 25182450 ~ 25182725 (+)
G785793 NA non-coding upstream 105230 25159312 ~ 25164194 (+)
G785695 NA non-coding upstream 126297 25137843 ~ 25143127 (+)
G785934 NA non-coding downstream 5571 25275405 ~ 25275691 (+)
G785940 NA non-coding downstream 13932 25283766 ~ 25284033 (+)
G785949 NA non-coding downstream 22699 25292533 ~ 25292819 (+)
G785950 trmt44 non-coding downstream 24230 25294064 ~ 25295094 (+)
G786004 NA non-coding downstream 50559 25320393 ~ 25320681 (+)
LOC110531788 LOC106577570 other upstream 317328 24872772 ~ 24952098 (+)
G785138 NA other upstream 686547 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 1182098 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 1430310 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1465287 23802151 ~ 23804811 (+)
LOC110531825 LOC106577732 other downstream 257839 25525371 ~ 25532692 (+)
G786091 NA other downstream 275397 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 443163 25712997 ~ 25742909 (+)
G786218 NA other downstream 688250 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 1143278 26413112 ~ 26413532 (+)

Expression


Co-expression Network