G786004


Basic Information

Item Value
gene id G786004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25320393 ~ 25320681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895184
gtattcagccatattcccagtcacctttccatgaTAAAATGTGGTGGTTCgcattgtgtgtctgtctgtgtctgtgaacaTACTCAGTGTACAGTGGctctggaaagtattcagaccccttgacttttcccacattttgttacattacagccttattctgaaatggattaaagagactcgaaattgagctcaggtgcatctagtttccattgatcatccttgagatgtttctacaacttgattggagtacacctgtggtaaattcaattgattggacatgatttggaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895184 True 289 lncRNA 0.40 1 25320393 25320681

Neighbor

gene id symbol gene type direction distance location
LOC110531807 hmx1 coding upstream 122808 25194781 ~ 25197585 (+)
LOC110531806 LOC106577568 coding upstream 212168 25103853 ~ 25108225 (+)
trnaa-ugc-31 NA coding upstream 293752 25026571 ~ 25026641 (+)
LOC110532977 LOC106577569 coding upstream 302948 24971751 ~ 25017445 (+)
LOC110531794 LOC106577572 coding upstream 348933 24952826 ~ 24971460 (+)
LOC110531811 LOC106577563 coding downstream 3318 25323999 ~ 25339758 (+)
LOC110531816 NA coding downstream 46684 25367365 ~ 25369664 (+)
LOC110533008 NA coding downstream 75598 25396279 ~ 25397954 (+)
LOC110531817 LOC106577558 coding downstream 78828 25399509 ~ 25410386 (+)
LOC110531818 LOC106577557 coding downstream 91090 25411771 ~ 25418108 (+)
G785950 trmt44 non-coding upstream 25299 25294064 ~ 25295094 (+)
G785949 NA non-coding upstream 27574 25292533 ~ 25292819 (+)
G785940 NA non-coding upstream 36360 25283766 ~ 25284033 (+)
G785934 NA non-coding upstream 44702 25275405 ~ 25275691 (+)
G785930 NA non-coding upstream 50559 25269424 ~ 25269834 (+)
G786005 NA non-coding downstream 190 25320871 ~ 25321129 (+)
G786068 NA non-coding downstream 165731 25486412 ~ 25486645 (+)
G786089 NA non-coding downstream 216843 25537524 ~ 25543652 (+)
LOC110531788 LOC106577570 other upstream 368297 24872772 ~ 24952098 (+)
G785138 NA other upstream 737516 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 1233067 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 1481279 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1516256 23802151 ~ 23804811 (+)
LOC110531825 LOC106577732 other downstream 206992 25525371 ~ 25532692 (+)
G786091 NA other downstream 224550 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 392316 25712997 ~ 25742909 (+)
G786218 NA other downstream 637403 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 1092431 26413112 ~ 26413532 (+)

Expression


Co-expression Network