Gene
RNA
| Item | Value |
|---|---|
| gene id | G786109 |
| gene name | LOC106577552 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 25574195 ~ 25577299 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| macrophage-capping protein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU895298 | True | 815 | lncRNA | 0.51 | 2 | 25574195 | 25577299 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966182 | NA | coding | upstream | 26295 | 25547105 ~ 25547900 (+) |
| LOC118966181 | NA | coding | upstream | 32159 | 25540981 ~ 25542036 (+) |
| LOC118936682 | NA | coding | upstream | 38022 | 25532430 ~ 25536173 (+) |
| LOC110531825 | LOC106577732 | coding | upstream | 41503 | 25525371 ~ 25532692 (+) |
| LOC110531824 | LOC106577554 | coding | upstream | 50678 | 25508544 ~ 25523517 (+) |
| zbtb4 | LOC106577551 | coding | downstream | 26462 | 25603761 ~ 25629568 (+) |
| shbg | LOC100135850 | coding | downstream | 58383 | 25635682 ~ 25641068 (+) |
| LOC110531830 | LOC106577548 | coding | downstream | 75964 | 25653263 ~ 25662373 (+) |
| LOC110531832 | LOC106577546 | coding | downstream | 87179 | 25664478 ~ 25678818 (+) |
| LOC110531831 | LOC106577545 | coding | downstream | 102980 | 25680279 ~ 25712960 (+) |
| G786089 | NA | non-coding | upstream | 30543 | 25537524 ~ 25543652 (+) |
| G786068 | NA | non-coding | upstream | 87550 | 25486412 ~ 25486645 (+) |
| LOC110531817 | LOC106577558 | non-coding | upstream | 163815 | 25399509 ~ 25410386 (+) |
| LOC110531811 | LOC106577563 | non-coding | upstream | 236827 | 25323999 ~ 25339758 (+) |
| G786133 | NA | non-coding | downstream | 42778 | 25620077 ~ 25620295 (+) |
| G786134 | NA | non-coding | downstream | 64513 | 25641812 ~ 25642049 (+) |
| G786166 | NA | non-coding | downstream | 167001 | 25744300 ~ 25744526 (+) |
| G785958 | NA | non-coding | downstream | 182175 | 25759474 ~ 25762167 (+) |
| G786091 | NA | other | upstream | 27228 | 25545231 ~ 25546967 (+) |
| LOC110531788 | LOC106577570 | other | upstream | 622099 | 24872772 ~ 24952098 (+) |
| G785138 | NA | other | upstream | 991318 | 24582387 ~ 24582877 (+) |
| hacd4 | hacd4 | other | upstream | 1486869 | 24077880 ~ 24087340 (+) |
| G785962 | LOC105020693 | other | downstream | 135698 | 25712997 ~ 25742909 (+) |
| G786218 | NA | other | downstream | 380785 | 25874527 ~ 25958867 (+) |
| G786496 | LOC106577539 | other | downstream | 835813 | 26413112 ~ 26413532 (+) |
| G787022 | LOC106577527 | other | downstream | 1802033 | 27379332 ~ 27379664 (+) |
| taf6l | taf6l | other | downstream | 1908495 | 27480038 ~ 27487523 (+) |
