G786166


Basic Information

Item Value
gene id G786166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25744300 ~ 25744526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895362
caccataccccataatgaaaaacagaaataccttatttacataagtattcagaccctttgctatgagactcaaaattgagctcaggcgcatcctgtttccattgatcatccttgagatgtttctacaacttaattggagtccacctgtggaaaattccatggattggacatgatttgaaaagacccacacctgtttatatacgatcctacagttgacagtgcatgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895362 True 227 lncRNA 0.39 1 25744300 25744526

Neighbor

gene id symbol gene type direction distance location
LOC110531831 LOC106577545 coding upstream 31340 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 65482 25664478 ~ 25678818 (+)
LOC110531830 LOC106577548 coding upstream 82151 25653263 ~ 25662373 (+)
shbg LOC100135850 coding upstream 103232 25635682 ~ 25641068 (+)
zbtb4 LOC106577551 coding upstream 114732 25603761 ~ 25629568 (+)
LOC110531834 LOC106577543 coding downstream 5376 25749902 ~ 25758055 (+)
LOC110531838 drap1 coding downstream 41570 25786096 ~ 25791195 (+)
LOC110531839 LOC106577540 coding downstream 48240 25792766 ~ 25832287 (+)
alpk1 alpk1 coding downstream 1451995 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 1469593 27214119 ~ 27220387 (+)
G786134 NA non-coding upstream 102251 25641812 ~ 25642049 (+)
G786133 NA non-coding upstream 124005 25620077 ~ 25620295 (+)
G786109 LOC106577552 non-coding upstream 167001 25574195 ~ 25577299 (+)
LOC118966182 NA non-coding upstream 196524 25547105 ~ 25547900 (+)
G785958 NA non-coding downstream 14948 25759474 ~ 25762167 (+)
G786171 NA non-coding downstream 19742 25764268 ~ 25764485 (+)
G786172 NA non-coding downstream 20178 25764704 ~ 25764984 (+)
G786174 NA non-coding downstream 22117 25766643 ~ 25766843 (+)
G786183 NA non-coding downstream 30285 25774811 ~ 25775218 (+)
G785962 LOC105020693 other upstream 1391 25712997 ~ 25742909 (+)
G786091 NA other upstream 197333 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 212023 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 792204 24872772 ~ 24952098 (+)
G785138 NA other upstream 1161423 24582387 ~ 24582877 (+)
G786218 NA other downstream 213558 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 668586 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1634806 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1741268 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 3595455 29248127 ~ 29342203 (+)

Expression


Co-expression Network