G786183


Basic Information

Item Value
gene id G786183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25774811 ~ 25775218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895379
gtctgggctgtgtgcttaggttcgttgtcctCGCGTAAGATGAACCTTCAagtcagtctgaggtcctgagcgctctggagcaggttttcatcaaggatctcgctgtactttgctccgttcatctttgcctcgatcctgactagactcccagtccctgcctctgaaaaacatccccagagcatgatgctgccaccactatgcttcaccgtagggacggtgccaggtttcctccagacgtaatgcttgacattcaggccaaagagttcaatcttggtttcatcagaccagagaatcttgtttctcatggtctgagagtctttaggtgccttttggcaaacttcaagcgggctgtcatgtgcctttttctgaggagtggtttccgtctggccactctaccataaaggcctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895379 True 408 lncRNA 0.51 1 25774811 25775218

Neighbor

gene id symbol gene type direction distance location
LOC110531834 LOC106577543 coding upstream 16756 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 61851 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 95993 25664478 ~ 25678818 (+)
LOC110531830 LOC106577548 coding upstream 112662 25653263 ~ 25662373 (+)
shbg LOC100135850 coding upstream 133743 25635682 ~ 25641068 (+)
LOC110531838 drap1 coding downstream 10878 25786096 ~ 25791195 (+)
LOC110531839 LOC106577540 coding downstream 17548 25792766 ~ 25832287 (+)
alpk1 alpk1 coding downstream 1421303 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 1438901 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 1481385 27256603 ~ 27267492 (+)
G786174 NA non-coding upstream 7968 25766643 ~ 25766843 (+)
G786172 NA non-coding upstream 9827 25764704 ~ 25764984 (+)
G786171 NA non-coding upstream 10326 25764268 ~ 25764485 (+)
G785958 NA non-coding upstream 12644 25759474 ~ 25762167 (+)
G786166 NA non-coding upstream 30285 25744300 ~ 25744526 (+)
G786188 NA non-coding downstream 6522 25781740 ~ 25781949 (+)
G786189 NA non-coding downstream 7004 25782222 ~ 25783314 (+)
G786205 NA non-coding downstream 61945 25837163 ~ 25837537 (+)
G786218 NA non-coding downstream 99309 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 31902 25712997 ~ 25742909 (+)
G786091 NA other upstream 227844 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 242534 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 822715 24872772 ~ 24952098 (+)
G785138 NA other upstream 1191934 24582387 ~ 24582877 (+)
G786496 LOC106577539 other downstream 637894 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1604114 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1710576 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 3564763 29248127 ~ 29342203 (+)

Expression


Co-expression Network