Gene
RNA
| Item | Value |
|---|---|
| gene id | G786189 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 25782222 ~ 25783314 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU895386 | True | 846 | lncRNA | 0.48 | 2 | 25782222 | 25783314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531834 | LOC106577543 | coding | upstream | 24167 | 25749902 ~ 25758055 (+) |
| LOC110531831 | LOC106577545 | coding | upstream | 69262 | 25680279 ~ 25712960 (+) |
| LOC110531832 | LOC106577546 | coding | upstream | 103404 | 25664478 ~ 25678818 (+) |
| LOC110531830 | LOC106577548 | coding | upstream | 120073 | 25653263 ~ 25662373 (+) |
| shbg | LOC100135850 | coding | upstream | 141154 | 25635682 ~ 25641068 (+) |
| LOC110531838 | drap1 | coding | downstream | 2782 | 25786096 ~ 25791195 (+) |
| LOC110531839 | LOC106577540 | coding | downstream | 9452 | 25792766 ~ 25832287 (+) |
| alpk1 | alpk1 | coding | downstream | 1413207 | 27196521 ~ 27213187 (+) |
| epdl1 | LOC106577537 | coding | downstream | 1430805 | 27214119 ~ 27220387 (+) |
| LOC110531847 | NA | coding | downstream | 1473289 | 27256603 ~ 27267492 (+) |
| G786188 | NA | non-coding | upstream | 273 | 25781740 ~ 25781949 (+) |
| G786183 | NA | non-coding | upstream | 7004 | 25774811 ~ 25775218 (+) |
| G786174 | NA | non-coding | upstream | 15379 | 25766643 ~ 25766843 (+) |
| G786172 | NA | non-coding | upstream | 17238 | 25764704 ~ 25764984 (+) |
| G786171 | NA | non-coding | upstream | 17737 | 25764268 ~ 25764485 (+) |
| G786205 | NA | non-coding | downstream | 53849 | 25837163 ~ 25837537 (+) |
| G786218 | NA | non-coding | downstream | 91213 | 25874527 ~ 25958867 (+) |
| G786227 | NA | non-coding | downstream | 113604 | 25896918 ~ 25917477 (+) |
| G786222 | NA | non-coding | downstream | 122908 | 25906222 ~ 25927271 (+) |
| G785962 | LOC105020693 | other | upstream | 39313 | 25712997 ~ 25742909 (+) |
| G786091 | NA | other | upstream | 235255 | 25545231 ~ 25546967 (+) |
| LOC110531825 | LOC106577732 | other | upstream | 249945 | 25525371 ~ 25532692 (+) |
| LOC110531788 | LOC106577570 | other | upstream | 830126 | 24872772 ~ 24952098 (+) |
| G785138 | NA | other | upstream | 1199345 | 24582387 ~ 24582877 (+) |
| G786496 | LOC106577539 | other | downstream | 629798 | 26413112 ~ 26413532 (+) |
| G787022 | LOC106577527 | other | downstream | 1596018 | 27379332 ~ 27379664 (+) |
| taf6l | taf6l | other | downstream | 1702480 | 27480038 ~ 27487523 (+) |
| rbpjb | LOC106577485 | other | downstream | 3556667 | 29248127 ~ 29342203 (+) |
