G787350


Basic Information

Item Value
gene id G787350
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25875435 ~ 25894404 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU896721
actgtaaatatgttagagagagatgataaaacactgactgtaaatatgttagagagagatgagaaaacaatgacagtaaatatgttagagagagatgagaaaatactgacagtaaatatgttagagagagatgagaaaaaactgacagtaaatatgttagagatgagaaaacactgacagtaaatatgttagagatgagaacactgacagtaaatatgttagagagagatgagaaaacactgacagtaaatatgttagagatgagaaaaaactgacagtaaatatggtagagagagatagaaaaacagagacagtatatatggtagagagagatgataaaacattgacagtaaatatgttagagagagatgagaaaacactgacagtaaatatgttagagagtgatgataaaacactgacagtaaatatgttagagataagaaaacactgacagtaaatatgttagagagatgagaacactgacagtaaatatgttagagagagatgagaaaacactgacagttaatttgtcagagagagatgagaaaacactgacagtaaatatgttacagagagatgagaaaacactgacagtaaatatgtcagagagagatgagaaaacactgacagtaaatatgttacagagagatgagaaaacactgacagtaaatatgttagagagagatgagaaaacactgacagttaatatgttacagagagatgagaaaacactgacattaAATATGTtacagagagatgagaaaacactgacagttaatatgttacagagagatgagaaaacactgacagtaaatatgttacagagagatgagaaaacactgactgtaaatatgttagagagagatgagaaaacactgacagttaatttgtcagagagagatgagaa

Function

NR:

description
PREDICTED: serine/arginine repetitive matrix protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU896721 True 907 TUCP 0.32 2 25875435 25894404

Neighbor

gene id symbol gene type direction distance location
LOC110531837 cssa07h11orf68 coding downstream 90254 25783933 ~ 25785181 (-)
LOC110531833 LOC105020693 coding downstream 132714 25712971 ~ 25742721 (-)
polr2a LOC106577550 coding downstream 272137 25586530 ~ 25603298 (-)
LOC110531827 LOC106577552 coding downstream 293187 25570616 ~ 25582248 (-)
LOC110531826 LOC106577553 coding downstream 310544 25554016 ~ 25564891 (-)
trnaa-ugc-32 NA coding upstream 398425 26292829 ~ 26292904 (-)
LOC110531842 rasgrp2 coding upstream 1222551 27116955 ~ 27196041 (-)
cskmt LOC106577536 coding upstream 1325982 27220386 ~ 27221976 (-)
LOC110531843 LOC106608596 coding upstream 1327662 27222066 ~ 27234759 (-)
LOC110531846 LOC106577533 coding upstream 1352990 27247394 ~ 27271316 (-)
G787544 NA non-coding downstream 11538 25863496 ~ 25863897 (-)
G787543 NA non-coding downstream 15959 25859044 ~ 25859476 (-)
G787538 NA non-coding downstream 19659 25855254 ~ 25855776 (-)
G787500 NA non-coding downstream 43154 25830720 ~ 25832281 (-)
G787499 LOC106577540 non-coding downstream 80723 25792839 ~ 25794712 (-)
G787362 NA non-coding upstream 12681 25907085 ~ 25914575 (-)
G787353 NA non-coding upstream 16868 25911272 ~ 25943002 (-)
G787337 NA non-coding upstream 19481 25913885 ~ 25932065 (-)
G787367 NA non-coding upstream 27751 25922155 ~ 25925918 (-)
LOC110531840 LOC106577539 non-coding upstream 323388 25865990 ~ 26900452 (-)
G787386 NA other downstream 351923 25522038 ~ 25619623 (-)
LOC110531812 LOC106577560 other downstream 517619 25338581 ~ 25365749 (-)
trmt44 trmt44 other downstream 571744 25294038 ~ 25309252 (-)
G787211 NA other downstream 583964 25290915 ~ 25291471 (-)
G785578 NA other downstream 910161 24963072 ~ 24965274 (-)
G787346 NA other upstream 30960 25925364 ~ 25955174 (-)
G788162 NA other upstream 1027508 26921912 ~ 26922402 (-)
G788171 NA other upstream 1038637 26933041 ~ 26933401 (-)
G788172 NA other upstream 1040723 26935127 ~ 26935506 (-)

Expression


Co-expression Network