G786227


Basic Information

Item Value
gene id G786227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25896918 ~ 25917477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895486
ttttctcatctctctctaacatatttactgtcattgttttctcatctctctctaacatatttacagtcagtgttttatcatctctctctaacatatttactgtcagtgtttctcatttctctctaacttatttaatttcagttttttctcatctctgcctacaatatactgtcagtgttttctcatctctctctaacatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895486 True 201 lncRNA 0.31 2 25896918 25917477

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 64631 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 105723 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 138863 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 183958 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 218100 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 1279044 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 1296642 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 1339126 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 1423221 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 1471414 27388891 ~ 27399023 (+)
G786205 NA non-coding upstream 59381 25837163 ~ 25837537 (+)
G786189 NA non-coding upstream 113604 25782222 ~ 25783314 (+)
G786188 NA non-coding upstream 114969 25781740 ~ 25781949 (+)
G786183 NA non-coding upstream 121700 25774811 ~ 25775218 (+)
G786219 NA non-coding downstream 10925 25928402 ~ 25934960 (+)
G786229 NA non-coding downstream 27555 25945032 ~ 25946326 (+)
G786270 NA non-coding downstream 111856 26029333 ~ 26104028 (+)
G786354 NA non-coding downstream 268668 26186145 ~ 26188032 (+)
G786366 NA non-coding downstream 300321 26217798 ~ 26218888 (+)
G785962 LOC105020693 other upstream 154009 25712997 ~ 25742909 (+)
G786091 NA other upstream 349951 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 364641 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 944822 24872772 ~ 24952098 (+)
G785138 NA other upstream 1314041 24582387 ~ 24582877 (+)
G786218 NA other downstream 40607 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 495635 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1461855 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1568317 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 3422504 29248127 ~ 29342203 (+)

Expression


Co-expression Network