G786224


Basic Information

Item Value
gene id G786224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25908741 ~ 25927067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895482
tgtcagtgttttctcatctctctctaacatatttactgtcagtgttttctcatctctctctaccatatttactgtcagggttttctcatctctctctaacatatttactgtcagtgttttctcatctctctctaacatatttactgtcagtgttttctcatctctctctaacatattaactgtcagtgttttctcctctctctaacatatttactgtcagtgttttctcatctctctctaacatatatactgtcagtgttttctcatctctctctaaaatatttactgtcagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895482 True 293 lncRNA 0.34 2 25908741 25927067

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 76454 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 117546 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 150686 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 195781 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 229923 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 1269454 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 1287052 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 1329536 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 1413631 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 1461824 27388891 ~ 27399023 (+)
G786205 NA non-coding upstream 71204 25837163 ~ 25837537 (+)
G786189 NA non-coding upstream 125427 25782222 ~ 25783314 (+)
G786188 NA non-coding upstream 126792 25781740 ~ 25781949 (+)
G786183 NA non-coding upstream 133523 25774811 ~ 25775218 (+)
G786219 NA non-coding downstream 1335 25928402 ~ 25934960 (+)
G786229 NA non-coding downstream 17965 25945032 ~ 25946326 (+)
G786270 NA non-coding downstream 102266 26029333 ~ 26104028 (+)
G786354 NA non-coding downstream 259078 26186145 ~ 26188032 (+)
G786366 NA non-coding downstream 290731 26217798 ~ 26218888 (+)
G785962 LOC105020693 other upstream 165832 25712997 ~ 25742909 (+)
G786091 NA other upstream 361774 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 376464 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 956645 24872772 ~ 24952098 (+)
G785138 NA other upstream 1325864 24582387 ~ 24582877 (+)
G786218 NA other downstream 31017 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 486045 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1452265 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1558727 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 3412914 29248127 ~ 29342203 (+)

Expression


Co-expression Network