G786354


Basic Information

Item Value
gene id G786354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26186145 ~ 26188032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895620
gaggaggggtaaggagagtgatgcagagtggagaaagagaggaggaggggtaaggagagtgatgcagggtggatgaagagaagaggaggggtaaggagagtgatccagggtggaggaagagaagaggaggggtaaggagagtgatgcagggtggaggaagagaagaggagaggtaaggagactgatgcagggtggaggaagagtgaaggaggggtaaggagagtgatgcagggtggaggaagagaagaggaggggtaaggagagagatgcagggtggaggaagagaagaagaggggtaaggagagtggcgggggaagagaagaggaggggtaaggagagtgatgcagggtggttgaagagaggaggaggggtgaggagagtgatgcagggtggaggaagagaggaggaggggtgaggagagtgatgcagggtggaggaagtgaagaggaggggtaaggagagtgatgcagggtggaggaagagaggaggatgggtaaggagagtggtggaggaagagaagaggaggggtaaggagagtgatgcagggtggaggaagagaagaggaggagtaaggagagtgatgcagggtggaggaagagaagacgaggggtaaggagagtgatgcagggtggaggaagagaagaggaggggtaaggagagtaatgcagggtggaggaagagaagaggtgggggtaaggagagtgatgcagagtggaggaagagaagaggaggggtaaggagagggATGCAGGgtgaaggaagagaagaggaggggtaaggagagtgatgcagggtggaggaagagaagaaaaggggtaaggagagtgatgcagggtggaggaagagaagaggaggggtaaggagagtgatgcagagtggagaaagagaggaggaggggtaaggagagtgatgcagggtggatgaagagaagaggaggggtaaggagagtgatccagggtggaggaagagaagaagaggggtaaggagagtgatgcagggtggaggaagagaagaagaggggtaaggagagtgatgcagggtggaggaagagtggaggaggggtaaggagagtgatgcagggtggaggaagagaagaggaggggtaaggagagagatgcagggtggaggaagaaaagaggaggggtaaggaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895620 True 1152 lncRNA 0.55 2 26186145 26188032

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 353858 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 394950 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 428090 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 473185 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 507327 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 1008489 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 1026087 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 1068571 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 1152666 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 1200859 27388891 ~ 27399023 (+)
G786270 NA non-coding upstream 82117 26029333 ~ 26104028 (+)
G786218 NA non-coding upstream 227278 25874527 ~ 25958867 (+)
G786220 NA non-coding upstream 239128 25913952 ~ 25947017 (+)
G786229 NA non-coding upstream 239819 25945032 ~ 25946326 (+)
G786219 NA non-coding upstream 251185 25928402 ~ 25934960 (+)
G786366 NA non-coding downstream 29766 26217798 ~ 26218888 (+)
G786367 NA non-coding downstream 36192 26224224 ~ 26224434 (+)
G786387 NA non-coding downstream 68013 26256045 ~ 26256438 (+)
G786401 NA non-coding downstream 95643 26283675 ~ 26283881 (+)
G786408 NA non-coding downstream 104782 26292814 ~ 26293105 (+)
G785962 LOC105020693 other upstream 443236 25712997 ~ 25742909 (+)
G786091 NA other upstream 639178 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 653868 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 1234049 24872772 ~ 24952098 (+)
G786496 LOC106577539 other downstream 225080 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1191300 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1297762 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 3151949 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 4094643 30282637 ~ 30288163 (+)

Expression


Co-expression Network