Gene
RNA
| Item | Value |
|---|---|
| gene id | G786366 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 26217798 ~ 26218888 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU895633 | True | 1091 | lncRNA | 0.49 | 1 | 26217798 | 26218888 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531839 | LOC106577540 | coding | upstream | 385511 | 25792766 ~ 25832287 (+) |
| LOC110531838 | drap1 | coding | upstream | 426603 | 25786096 ~ 25791195 (+) |
| LOC110531834 | LOC106577543 | coding | upstream | 459743 | 25749902 ~ 25758055 (+) |
| LOC110531831 | LOC106577545 | coding | upstream | 504838 | 25680279 ~ 25712960 (+) |
| LOC110531832 | LOC106577546 | coding | upstream | 538980 | 25664478 ~ 25678818 (+) |
| alpk1 | alpk1 | coding | downstream | 977633 | 27196521 ~ 27213187 (+) |
| epdl1 | LOC106577537 | coding | downstream | 995231 | 27214119 ~ 27220387 (+) |
| LOC110531847 | NA | coding | downstream | 1037715 | 27256603 ~ 27267492 (+) |
| LOC110531852 | rtn3 | coding | downstream | 1121810 | 27340698 ~ 27375922 (+) |
| LOC110531855 | LOC106577526 | coding | downstream | 1170003 | 27388891 ~ 27399023 (+) |
| G786354 | NA | non-coding | upstream | 29766 | 26186145 ~ 26188032 (+) |
| G786270 | NA | non-coding | upstream | 113770 | 26029333 ~ 26104028 (+) |
| G786220 | NA | non-coding | upstream | 270781 | 25913952 ~ 25947017 (+) |
| G786229 | NA | non-coding | upstream | 271472 | 25945032 ~ 25946326 (+) |
| G786219 | NA | non-coding | upstream | 282838 | 25928402 ~ 25934960 (+) |
| G786367 | NA | non-coding | downstream | 5336 | 26224224 ~ 26224434 (+) |
| G786387 | NA | non-coding | downstream | 37157 | 26256045 ~ 26256438 (+) |
| G786401 | NA | non-coding | downstream | 64787 | 26283675 ~ 26283881 (+) |
| G786408 | NA | non-coding | downstream | 73926 | 26292814 ~ 26293105 (+) |
| G786409 | NA | non-coding | downstream | 77507 | 26296395 ~ 26296694 (+) |
| G786218 | NA | other | upstream | 258931 | 25874527 ~ 25958867 (+) |
| G785962 | LOC105020693 | other | upstream | 474889 | 25712997 ~ 25742909 (+) |
| G786091 | NA | other | upstream | 670831 | 25545231 ~ 25546967 (+) |
| LOC110531825 | LOC106577732 | other | upstream | 685521 | 25525371 ~ 25532692 (+) |
| LOC110531788 | LOC106577570 | other | upstream | 1265702 | 24872772 ~ 24952098 (+) |
| G786496 | LOC106577539 | other | downstream | 194224 | 26413112 ~ 26413532 (+) |
| G787022 | LOC106577527 | other | downstream | 1160444 | 27379332 ~ 27379664 (+) |
| taf6l | taf6l | other | downstream | 1266906 | 27480038 ~ 27487523 (+) |
| rbpjb | LOC106577485 | other | downstream | 3121093 | 29248127 ~ 29342203 (+) |
| LOC110531891 | NA | other | downstream | 4063787 | 30282637 ~ 30288163 (+) |
