G786409


Basic Information

Item Value
gene id G786409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26296395 ~ 26296694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895681
gtataaacaagtctatatacgatgtgagcaaatgaggtgggataagggaggtaaaggcaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacactggaatggtagatttgcaatgggagaatgtgcaaagtagaaataaaaataatggggtgcaaaggagcaaaataaataaataaatgaaatacagtagggaaagaggtagttgtttgggccaaattataggtgggctatgtacaggtgcagtaatctgtgagctgctctgacagttggtgcttaaagctagtgaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895681 True 300 lncRNA 0.39 1 26296395 26296694

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 464108 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 505200 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 538340 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 583435 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 617577 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 899827 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 917425 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 959909 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 1044004 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 1092197 27388891 ~ 27399023 (+)
G786408 NA non-coding upstream 3290 26292814 ~ 26293105 (+)
G786401 NA non-coding upstream 12514 26283675 ~ 26283881 (+)
G786387 NA non-coding upstream 39957 26256045 ~ 26256438 (+)
G786367 NA non-coding upstream 71961 26224224 ~ 26224434 (+)
G786366 NA non-coding upstream 77507 26217798 ~ 26218888 (+)
G786411 NA non-coding downstream 1241 26297935 ~ 26298314 (+)
G786426 NA non-coding downstream 20142 26316836 ~ 26317117 (+)
G786428 NA non-coding downstream 21898 26318592 ~ 26318905 (+)
G786439 NA non-coding downstream 41562 26338256 ~ 26338606 (+)
G786444 NA non-coding downstream 49514 26346208 ~ 26346430 (+)
G786218 NA other upstream 337528 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 553486 25712997 ~ 25742909 (+)
G786091 NA other upstream 749428 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 764118 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 1344299 24872772 ~ 24952098 (+)
G786496 LOC106577539 other downstream 116418 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1082638 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1189100 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 3043287 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3985981 30282637 ~ 30288163 (+)

Expression


Co-expression Network