Gene
RNA
| Item | Value |
|---|---|
| gene id | G786444 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 26346208 ~ 26346430 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU895718 | True | 223 | lncRNA | 0.42 | 1 | 26346208 | 26346430 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531839 | LOC106577540 | coding | upstream | 513921 | 25792766 ~ 25832287 (+) |
| LOC110531838 | drap1 | coding | upstream | 555013 | 25786096 ~ 25791195 (+) |
| LOC110531834 | LOC106577543 | coding | upstream | 588153 | 25749902 ~ 25758055 (+) |
| LOC110531831 | LOC106577545 | coding | upstream | 633248 | 25680279 ~ 25712960 (+) |
| LOC110531832 | LOC106577546 | coding | upstream | 667390 | 25664478 ~ 25678818 (+) |
| alpk1 | alpk1 | coding | downstream | 850091 | 27196521 ~ 27213187 (+) |
| epdl1 | LOC106577537 | coding | downstream | 867689 | 27214119 ~ 27220387 (+) |
| LOC110531847 | NA | coding | downstream | 910173 | 27256603 ~ 27267492 (+) |
| LOC110531852 | rtn3 | coding | downstream | 994268 | 27340698 ~ 27375922 (+) |
| LOC110531855 | LOC106577526 | coding | downstream | 1042461 | 27388891 ~ 27399023 (+) |
| G786439 | NA | non-coding | upstream | 7602 | 26338256 ~ 26338606 (+) |
| G786428 | NA | non-coding | upstream | 27303 | 26318592 ~ 26318905 (+) |
| G786426 | NA | non-coding | upstream | 29091 | 26316836 ~ 26317117 (+) |
| G786411 | NA | non-coding | upstream | 47894 | 26297935 ~ 26298314 (+) |
| G786409 | NA | non-coding | upstream | 49514 | 26296395 ~ 26296694 (+) |
| G786454 | NA | non-coding | downstream | 10825 | 26357255 ~ 26357471 (+) |
| G786458 | NA | non-coding | downstream | 15163 | 26361593 ~ 26361834 (+) |
| G786466 | NA | non-coding | downstream | 23373 | 26369803 ~ 26370023 (+) |
| G786471 | LOC106525548 | non-coding | downstream | 30099 | 26376529 ~ 26377202 (+) |
| G786473 | LOC106608688 | non-coding | downstream | 31903 | 26378333 ~ 26378694 (+) |
| G786218 | NA | other | upstream | 387341 | 25874527 ~ 25958867 (+) |
| G785962 | LOC105020693 | other | upstream | 603299 | 25712997 ~ 25742909 (+) |
| G786091 | NA | other | upstream | 799241 | 25545231 ~ 25546967 (+) |
| LOC110531825 | LOC106577732 | other | upstream | 813931 | 25525371 ~ 25532692 (+) |
| LOC110531788 | LOC106577570 | other | upstream | 1394112 | 24872772 ~ 24952098 (+) |
| G786496 | LOC106577539 | other | downstream | 66682 | 26413112 ~ 26413532 (+) |
| G787022 | LOC106577527 | other | downstream | 1032902 | 27379332 ~ 27379664 (+) |
| taf6l | taf6l | other | downstream | 1139364 | 27480038 ~ 27487523 (+) |
| rbpjb | LOC106577485 | other | downstream | 2993551 | 29248127 ~ 29342203 (+) |
| LOC110531891 | NA | other | downstream | 3936245 | 30282637 ~ 30288163 (+) |
