G786458


Basic Information

Item Value
gene id G786458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26361593 ~ 26361834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895732
ttcacttcctccctgtaggctgtctcgttgttgttggtaatcaagcccactactgttgtatcgtctgcaaacttgatgattgagttggaggagtgaATGGCCACGgagtcattggtgaacagggagtacaggagggggctgagcacacaccactgtggggccccagtgttgaggatcagcaaagtggagatgttgtttcctaccttcaccacctggaggtggcctgtcagaaagtccaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895732 True 242 lncRNA 0.52 1 26361593 26361834

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 529306 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 570398 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 603538 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 648633 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 682775 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 834687 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 852285 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 894769 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 978864 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 1027057 27388891 ~ 27399023 (+)
G786454 NA non-coding upstream 4122 26357255 ~ 26357471 (+)
G786444 NA non-coding upstream 15163 26346208 ~ 26346430 (+)
G786439 NA non-coding upstream 22987 26338256 ~ 26338606 (+)
G786428 NA non-coding upstream 42688 26318592 ~ 26318905 (+)
G786426 NA non-coding upstream 44476 26316836 ~ 26317117 (+)
G786466 NA non-coding downstream 7969 26369803 ~ 26370023 (+)
G786471 LOC106525548 non-coding downstream 14695 26376529 ~ 26377202 (+)
G786473 LOC106608688 non-coding downstream 16499 26378333 ~ 26378694 (+)
G786474 NA non-coding downstream 18355 26380189 ~ 26380471 (+)
G786475 NA non-coding downstream 18899 26380733 ~ 26381001 (+)
G786218 NA other upstream 402726 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 618684 25712997 ~ 25742909 (+)
G786091 NA other upstream 814626 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 829316 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 1409497 24872772 ~ 24952098 (+)
G786496 LOC106577539 other downstream 51278 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1017498 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1123960 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 2978147 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3920841 30282637 ~ 30288163 (+)

Expression


Co-expression Network