Gene
RNA
| Item | Value |
|---|---|
| gene id | G786466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 26369803 ~ 26370023 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU895740 | True | 221 | lncRNA | 0.52 | 1 | 26369803 | 26370023 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531839 | LOC106577540 | coding | upstream | 537516 | 25792766 ~ 25832287 (+) |
| LOC110531838 | drap1 | coding | upstream | 578608 | 25786096 ~ 25791195 (+) |
| LOC110531834 | LOC106577543 | coding | upstream | 611748 | 25749902 ~ 25758055 (+) |
| LOC110531831 | LOC106577545 | coding | upstream | 656843 | 25680279 ~ 25712960 (+) |
| LOC110531832 | LOC106577546 | coding | upstream | 690985 | 25664478 ~ 25678818 (+) |
| alpk1 | alpk1 | coding | downstream | 826498 | 27196521 ~ 27213187 (+) |
| epdl1 | LOC106577537 | coding | downstream | 844096 | 27214119 ~ 27220387 (+) |
| LOC110531847 | NA | coding | downstream | 886580 | 27256603 ~ 27267492 (+) |
| LOC110531852 | rtn3 | coding | downstream | 970675 | 27340698 ~ 27375922 (+) |
| LOC110531855 | LOC106577526 | coding | downstream | 1018868 | 27388891 ~ 27399023 (+) |
| G786458 | NA | non-coding | upstream | 7969 | 26361593 ~ 26361834 (+) |
| G786454 | NA | non-coding | upstream | 12332 | 26357255 ~ 26357471 (+) |
| G786444 | NA | non-coding | upstream | 23373 | 26346208 ~ 26346430 (+) |
| G786439 | NA | non-coding | upstream | 31197 | 26338256 ~ 26338606 (+) |
| G786428 | NA | non-coding | upstream | 50898 | 26318592 ~ 26318905 (+) |
| G786471 | LOC106525548 | non-coding | downstream | 6506 | 26376529 ~ 26377202 (+) |
| G786473 | LOC106608688 | non-coding | downstream | 8310 | 26378333 ~ 26378694 (+) |
| G786474 | NA | non-coding | downstream | 10166 | 26380189 ~ 26380471 (+) |
| G786475 | NA | non-coding | downstream | 10710 | 26380733 ~ 26381001 (+) |
| G786477 | NA | non-coding | downstream | 12584 | 26382607 ~ 26382819 (+) |
| G786218 | NA | other | upstream | 410936 | 25874527 ~ 25958867 (+) |
| G785962 | LOC105020693 | other | upstream | 626894 | 25712997 ~ 25742909 (+) |
| G786091 | NA | other | upstream | 822836 | 25545231 ~ 25546967 (+) |
| LOC110531825 | LOC106577732 | other | upstream | 837526 | 25525371 ~ 25532692 (+) |
| LOC110531788 | LOC106577570 | other | upstream | 1417707 | 24872772 ~ 24952098 (+) |
| G786496 | LOC106577539 | other | downstream | 43089 | 26413112 ~ 26413532 (+) |
| G787022 | LOC106577527 | other | downstream | 1009309 | 27379332 ~ 27379664 (+) |
| taf6l | taf6l | other | downstream | 1115771 | 27480038 ~ 27487523 (+) |
| rbpjb | LOC106577485 | other | downstream | 2969958 | 29248127 ~ 29342203 (+) |
| LOC110531891 | NA | other | downstream | 3912652 | 30282637 ~ 30288163 (+) |
