G786477


Basic Information

Item Value
gene id G786477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26382607 ~ 26382819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895751
caATTTTCATATTTCATTAAATAAATGTGTCTAAAAGTACTGtacatgtaaaatgcacataaactCAACAGTGacatgtttggattcagtcttgtgtcaagTGAACTGCCGTGTCCTCACATTTGGTCTAACAATTCCCCCATAACCTCCacactgttccctttcaattgctataGCGCTTAAGCATATGTTTTTCATATTACTTCAGTAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895751 True 213 lncRNA 0.36 1 26382607 26382819

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 550320 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 591412 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 624552 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 669647 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 703789 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 813702 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 831300 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 873784 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 957879 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 1006072 27388891 ~ 27399023 (+)
G786475 NA non-coding upstream 1606 26380733 ~ 26381001 (+)
G786474 NA non-coding upstream 2136 26380189 ~ 26380471 (+)
G786473 LOC106608688 non-coding upstream 3913 26378333 ~ 26378694 (+)
G786471 LOC106525548 non-coding upstream 5405 26376529 ~ 26377202 (+)
G786466 NA non-coding upstream 12584 26369803 ~ 26370023 (+)
G786486 NA non-coding downstream 12082 26394901 ~ 26395100 (+)
G786490 NA non-coding downstream 18453 26401272 ~ 26401515 (+)
G786493 nrxn2b non-coding downstream 26100 26408919 ~ 26409219 (+)
G786495 LOC106577539 non-coding downstream 28467 26411286 ~ 26411648 (+)
G786498 NA non-coding downstream 35525 26418344 ~ 26418570 (+)
G786218 NA other upstream 423740 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 639698 25712997 ~ 25742909 (+)
G786091 NA other upstream 835640 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 850330 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 1430511 24872772 ~ 24952098 (+)
G786496 LOC106577539 other downstream 30293 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 996513 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1102975 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 2957162 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3899856 30282637 ~ 30288163 (+)

Expression


Co-expression Network