G786498


Basic Information

Item Value
gene id G786498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26418344 ~ 26418570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895772
attctgaccctttgctatgagactcgaaattaagctcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcaattgattggacatgatttggaaagacacacacctgtctatataaaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtcgaaggaattgtccgtagagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895772 True 227 lncRNA 0.43 1 26418344 26418570

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 586057 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 627149 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 660289 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 705384 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 739526 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 777951 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 795549 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 838033 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 922128 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 970321 27388891 ~ 27399023 (+)
G786495 LOC106577539 non-coding upstream 6696 26411286 ~ 26411648 (+)
G786493 nrxn2b non-coding upstream 9125 26408919 ~ 26409219 (+)
G786490 NA non-coding upstream 16829 26401272 ~ 26401515 (+)
G786486 NA non-coding upstream 23244 26394901 ~ 26395100 (+)
G786477 NA non-coding upstream 35525 26382607 ~ 26382819 (+)
G786503 NA non-coding downstream 11412 26429982 ~ 26430216 (+)
G786504 NA non-coding downstream 11726 26430296 ~ 26430568 (+)
G786505 NA non-coding downstream 12992 26431562 ~ 26431832 (+)
G786513 NA non-coding downstream 20781 26439351 ~ 26439753 (+)
G786514 NA non-coding downstream 21289 26439859 ~ 26440082 (+)
G786496 LOC106577539 other upstream 4812 26413112 ~ 26413532 (+)
G786218 NA other upstream 459477 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 675435 25712997 ~ 25742909 (+)
G786091 NA other upstream 871377 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 886067 25525371 ~ 25532692 (+)
G787022 LOC106577527 other downstream 960762 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1067224 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 2921411 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3864105 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 5177426 31595996 ~ 31596918 (+)

Expression


Co-expression Network