G786522


Basic Information

Item Value
gene id G786522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26451670 ~ 26451891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895796
cagagagatccttgatgaaaacctgctccagagcgctcaggacctcagactggggtgaaggttcaccttccaacaggacaacgaccctaagcacacagccaagacaatgcaggactggcatcgggacaagtctctgcatGTCCTTGAGGGTTCGagccagagcccgtacttgaacccgatcaaacatctctggagagacctgaaaatagatgtgcagcaacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895796 True 222 lncRNA 0.53 1 26451670 26451891

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 619383 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 660475 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 693615 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 738710 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 772852 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 744630 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 762228 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 804712 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 888807 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 937000 27388891 ~ 27399023 (+)
G786514 NA non-coding upstream 11588 26439859 ~ 26440082 (+)
G786513 NA non-coding upstream 11917 26439351 ~ 26439753 (+)
G786505 NA non-coding upstream 19838 26431562 ~ 26431832 (+)
G786504 NA non-coding upstream 21102 26430296 ~ 26430568 (+)
G786503 NA non-coding upstream 21454 26429982 ~ 26430216 (+)
G786525 NA non-coding downstream 4702 26456593 ~ 26456934 (+)
G786526 LOC106577539 non-coding downstream 5847 26457738 ~ 26458028 (+)
G786532 NA non-coding downstream 16188 26468079 ~ 26468425 (+)
G786534 NA non-coding downstream 20077 26471968 ~ 26472347 (+)
G786536 NA non-coding downstream 24056 26475947 ~ 26476150 (+)
G786496 LOC106577539 other upstream 38138 26413112 ~ 26413532 (+)
G786218 NA other upstream 492803 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 708761 25712997 ~ 25742909 (+)
G786091 NA other upstream 904703 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 919393 25525371 ~ 25532692 (+)
G787022 LOC106577527 other downstream 927441 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1033903 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 2888090 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3830784 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 5144105 31595996 ~ 31596918 (+)

Expression


Co-expression Network