G786532


Basic Information

Item Value
gene id G786532
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26468079 ~ 26468425 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895806
ccccaagcatccttccaaagttgtggcaaaatggcttaaggacaacaaagttaaggtattggagtggccatcacaaagccccgacctcaatcctatagaaaatgtgtgggcagaactgaaagagcgtgtgcgagcaaggaggcctacaaacctgactcagttacaccagctctgtcaggaggaatgggccacaattcacccaacttattgtgggaagcttgtggaaggctacccgaaacatttgacccaagttaaaccatttaaaggcaatgctaccaaatactaattgagtgtatgtgaacttctgacccactgggaatgtgatgaaagaaataaaagctgaaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU895806 True 347 lncRNA 0.45 1 26468079 26468425

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 635792 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 676884 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 710024 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 755119 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 789261 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 728096 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 745694 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 788178 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 872273 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 920466 27388891 ~ 27399023 (+)
G786526 LOC106577539 non-coding upstream 10051 26457738 ~ 26458028 (+)
G786525 NA non-coding upstream 11145 26456593 ~ 26456934 (+)
G786522 NA non-coding upstream 16188 26451670 ~ 26451891 (+)
G786514 NA non-coding upstream 27997 26439859 ~ 26440082 (+)
G786513 NA non-coding upstream 28326 26439351 ~ 26439753 (+)
G786534 NA non-coding downstream 3543 26471968 ~ 26472347 (+)
G786536 NA non-coding downstream 7522 26475947 ~ 26476150 (+)
G786546 NA non-coding downstream 24614 26493039 ~ 26493364 (+)
G786566 NA non-coding downstream 55894 26524319 ~ 26524539 (+)
G786621 NA non-coding downstream 152491 26620916 ~ 26621161 (+)
G786496 LOC106577539 other upstream 54547 26413112 ~ 26413532 (+)
G786218 NA other upstream 509212 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 725170 25712997 ~ 25742909 (+)
G786091 NA other upstream 921112 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 935802 25525371 ~ 25532692 (+)
G787022 LOC106577527 other downstream 910907 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1017369 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 2871556 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3814250 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 5127571 31595996 ~ 31596918 (+)

Expression


Co-expression Network