G786534


Basic Information

Item Value
gene id G786534
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26471968 ~ 26472347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU895808
acaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctccagagcagtgatgttttggggctgttgctgggcaacacggactttcaactccctccaaagattttctatggggttgagatctggagactggctaggccactccaagaccttgaaatgcttcttacgaagccactccttcgttgcccgggcagtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatctccaatgcccttgctgatggaaggaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacacggatcagtcataatggtccctttgcagaaaaacagccccaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU895808 True 380 lncRNA 0.49 1 26471968 26472347

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 639681 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 680773 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 713913 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 759008 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 793150 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 724174 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 741772 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 784256 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 868351 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 916544 27388891 ~ 27399023 (+)
G786532 NA non-coding upstream 3543 26468079 ~ 26468425 (+)
G786526 LOC106577539 non-coding upstream 13940 26457738 ~ 26458028 (+)
G786525 NA non-coding upstream 15034 26456593 ~ 26456934 (+)
G786522 NA non-coding upstream 20077 26451670 ~ 26451891 (+)
G786514 NA non-coding upstream 31886 26439859 ~ 26440082 (+)
G786536 NA non-coding downstream 3600 26475947 ~ 26476150 (+)
G786546 NA non-coding downstream 20692 26493039 ~ 26493364 (+)
G786566 NA non-coding downstream 51972 26524319 ~ 26524539 (+)
G786621 NA non-coding downstream 148569 26620916 ~ 26621161 (+)
G786625 NA non-coding downstream 160612 26632959 ~ 26633235 (+)
G786496 LOC106577539 other upstream 58436 26413112 ~ 26413532 (+)
G786218 NA other upstream 513101 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 729059 25712997 ~ 25742909 (+)
G786091 NA other upstream 925001 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 939691 25525371 ~ 25532692 (+)
G787022 LOC106577527 other downstream 906985 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1013447 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 2867634 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3810328 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 5123649 31595996 ~ 31596918 (+)

Expression


Co-expression Network