Gene
RNA
| Item | Value |
|---|---|
| gene id | G786797 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 26933967 ~ 26934209 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110504120 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU896090 | True | 243 | lncRNA | 0.54 | 1 | 26933967 | 26934209 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531839 | LOC106577540 | coding | upstream | 1101680 | 25792766 ~ 25832287 (+) |
| LOC110531838 | drap1 | coding | upstream | 1142772 | 25786096 ~ 25791195 (+) |
| LOC110531834 | LOC106577543 | coding | upstream | 1175912 | 25749902 ~ 25758055 (+) |
| LOC110531831 | LOC106577545 | coding | upstream | 1221007 | 25680279 ~ 25712960 (+) |
| LOC110531832 | LOC106577546 | coding | upstream | 1255149 | 25664478 ~ 25678818 (+) |
| alpk1 | alpk1 | coding | downstream | 262312 | 27196521 ~ 27213187 (+) |
| epdl1 | LOC106577537 | coding | downstream | 279910 | 27214119 ~ 27220387 (+) |
| LOC110531847 | NA | coding | downstream | 322394 | 27256603 ~ 27267492 (+) |
| LOC110531852 | rtn3 | coding | downstream | 406489 | 27340698 ~ 27375922 (+) |
| LOC110531855 | LOC106577526 | coding | downstream | 454682 | 27388891 ~ 27399023 (+) |
| G786783 | NA | non-coding | upstream | 27326 | 26906228 ~ 26906641 (+) |
| G786625 | NA | non-coding | upstream | 300732 | 26632959 ~ 26633235 (+) |
| G786621 | NA | non-coding | upstream | 312806 | 26620916 ~ 26621161 (+) |
| G786566 | NA | non-coding | upstream | 409428 | 26524319 ~ 26524539 (+) |
| G786546 | NA | non-coding | upstream | 440603 | 26493039 ~ 26493364 (+) |
| G786798 | NA | non-coding | downstream | 16056 | 26950265 ~ 26950478 (+) |
| G786799 | NA | non-coding | downstream | 16580 | 26950789 ~ 26950990 (+) |
| G786877 | NA | non-coding | downstream | 136520 | 27070729 ~ 27070944 (+) |
| G786952 | NA | non-coding | downstream | 311361 | 27245570 ~ 27245845 (+) |
| G786965 | NA | non-coding | downstream | 343569 | 27277778 ~ 27277986 (+) |
| G786496 | LOC106577539 | other | upstream | 520435 | 26413112 ~ 26413532 (+) |
| G786218 | NA | other | upstream | 975100 | 25874527 ~ 25958867 (+) |
| G785962 | LOC105020693 | other | upstream | 1191058 | 25712997 ~ 25742909 (+) |
| G786091 | NA | other | upstream | 1387000 | 25545231 ~ 25546967 (+) |
| LOC110531825 | LOC106577732 | other | upstream | 1401690 | 25525371 ~ 25532692 (+) |
| G787022 | LOC106577527 | other | downstream | 445123 | 27379332 ~ 27379664 (+) |
| taf6l | taf6l | other | downstream | 551585 | 27480038 ~ 27487523 (+) |
| rbpjb | LOC106577485 | other | downstream | 2405772 | 29248127 ~ 29342203 (+) |
| LOC110531891 | NA | other | downstream | 3348466 | 30282637 ~ 30288163 (+) |
| G793757 | LOC107579696 | other | downstream | 4661787 | 31595996 ~ 31596918 (+) |
