G786798


Basic Information

Item Value
gene id G786798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 26950265 ~ 26950478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU896091
gttgggtatggtatgcaaattggagtgggtgtagggttttttggatgatggtgttgatgtgagccatgaccaacctttcaaggcacttcatggctacagatgtgagtgccacgggtcggtagtcatttaggcaggttaccttagtgatcttgggcacagggactatggtggtctgcttaaaacaggttggtattacagactcaaacagggagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU896091 True 214 lncRNA 0.48 1 26950265 26950478

Neighbor

gene id symbol gene type direction distance location
LOC110531839 LOC106577540 coding upstream 1117978 25792766 ~ 25832287 (+)
LOC110531838 drap1 coding upstream 1159070 25786096 ~ 25791195 (+)
LOC110531834 LOC106577543 coding upstream 1192210 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 1237305 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 1271447 25664478 ~ 25678818 (+)
alpk1 alpk1 coding downstream 246043 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 263641 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 306125 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 390220 27340698 ~ 27375922 (+)
LOC110531855 LOC106577526 coding downstream 438413 27388891 ~ 27399023 (+)
G786797 NA non-coding upstream 16056 26933967 ~ 26934209 (+)
G786783 NA non-coding upstream 43624 26906228 ~ 26906641 (+)
G786625 NA non-coding upstream 317030 26632959 ~ 26633235 (+)
G786621 NA non-coding upstream 329104 26620916 ~ 26621161 (+)
G786566 NA non-coding upstream 425726 26524319 ~ 26524539 (+)
G786799 NA non-coding downstream 311 26950789 ~ 26950990 (+)
G786877 NA non-coding downstream 120251 27070729 ~ 27070944 (+)
G786952 NA non-coding downstream 295092 27245570 ~ 27245845 (+)
G786965 NA non-coding downstream 327300 27277778 ~ 27277986 (+)
G786966 NA non-coding downstream 328209 27278687 ~ 27283799 (+)
G786496 LOC106577539 other upstream 536733 26413112 ~ 26413532 (+)
G786218 NA other upstream 991398 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 1207356 25712997 ~ 25742909 (+)
G786091 NA other upstream 1403298 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 1417988 25525371 ~ 25532692 (+)
G787022 LOC106577527 other downstream 428854 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 535316 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 2389503 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 3332197 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 4645518 31595996 ~ 31596918 (+)

Expression


Co-expression Network