G787069


Basic Information

Item Value
gene id G787069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 27501379 ~ 27506375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU896413
ccctataccagtctgctgttcccacatgcttcaagagggccaccattgttcctgttcccaagaaagctaaggtaactgagctaaacgactaccgccccgtagcactcacttccgtcatcatgaagtgctttaagagactagtcaaggaccatatcacctccaccctacctgacaccctagacccactccaatttgcttaccgcccaaataggtccacagacgatgcaatctcaaccacactgcacactgccctaacccatctggacaagaggaataccta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU896413 True 280 lncRNA 0.50 2 27501379 27506375

Neighbor

gene id symbol gene type direction distance location
kcnk7 LOC106577521 coding upstream 10941 27487648 ~ 27490438 (+)
taf6l taf6l coding upstream 13867 27480038 ~ 27487523 (+)
LOC110531858 LOC106577523 coding upstream 29944 27439042 ~ 27471435 (+)
LOC110531857 LOC106577522 coding upstream 62615 27407301 ~ 27438764 (+)
LOC110531855 LOC106577526 coding upstream 102356 27388891 ~ 27399023 (+)
LOC110533009 NA coding downstream 69066 27575441 ~ 27578315 (+)
LOC110531863 LOC100695098 coding downstream 82579 27588954 ~ 27599597 (+)
LOC110531865 LOC106577518 coding downstream 127261 27633636 ~ 27647365 (+)
trnaa-ugc-34 NA coding downstream 152106 27658481 ~ 27658556 (+)
LOC110531867 LOC106577513 coding downstream 262261 27768636 ~ 27772723 (+)
G787013 NA non-coding upstream 99670 27400367 ~ 27401709 (+)
G787016 NA non-coding upstream 101100 27399783 ~ 27400279 (+)
G787027 NA non-coding upstream 116397 27384716 ~ 27384982 (+)
G787002 NA non-coding upstream 123910 27376152 ~ 27377469 (+)
G787107 NA non-coding downstream 78088 27584463 ~ 27584768 (+)
G787118 NA non-coding downstream 114602 27620977 ~ 27623770 (+)
G788583 NA non-coding downstream 197640 27704015 ~ 27704232 (+)
G788588 NA non-coding downstream 201936 27708311 ~ 27708510 (+)
G787022 LOC106577527 other upstream 121715 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1087847 26413112 ~ 26413532 (+)
G786218 NA other upstream 1542512 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 1758470 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 1833606 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 2776300 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 4089621 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 4246960 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 4616307 32122682 ~ 32124851 (+)

Expression


Co-expression Network