G787107


Basic Information

Item Value
gene id G787107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 27584463 ~ 27584768 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU896453
gtgcaatcactggataataaactggatgagctccgatcaagactatcctaccaacgggacattaaatactgtaatatcttgtgtttcaccgagtcgtggctgaacgaagacatggataacatacagctggctgggttttccgtgcatcggcaagatagcacagctgcctccggtaaaacaaggggtggtggtctgtgtctacttgtcaataacagctggtgcactaaatctaatattaaggaagtctcaaggttttgctcacctgaggtagagtatctcatgataagctatagaccacacttttac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU896453 True 306 lncRNA 0.44 1 27584463 27584768

Neighbor

gene id symbol gene type direction distance location
LOC110533009 NA coding upstream 6148 27575441 ~ 27578315 (+)
LOC110531861 LOC106608584 coding upstream 22938 27494465 ~ 27561525 (+)
kcnk7 LOC106577521 coding upstream 94025 27487648 ~ 27490438 (+)
taf6l taf6l coding upstream 96951 27480038 ~ 27487523 (+)
LOC110531858 LOC106577523 coding upstream 113028 27439042 ~ 27471435 (+)
LOC110531863 LOC100695098 coding downstream 4186 27588954 ~ 27599597 (+)
LOC110531865 LOC106577518 coding downstream 48868 27633636 ~ 27647365 (+)
trnaa-ugc-34 NA coding downstream 73713 27658481 ~ 27658556 (+)
LOC110531867 LOC106577513 coding downstream 183868 27768636 ~ 27772723 (+)
ank2b LOC103361685 coding downstream 411111 27995879 ~ 28163412 (+)
G787069 NA non-coding upstream 78088 27501379 ~ 27506375 (+)
G787013 NA non-coding upstream 182754 27400367 ~ 27401709 (+)
G787016 NA non-coding upstream 184184 27399783 ~ 27400279 (+)
LOC110531855 LOC106577526 non-coding upstream 186832 27388891 ~ 27399023 (+)
G787118 NA non-coding downstream 36209 27620977 ~ 27623770 (+)
G788583 NA non-coding downstream 119247 27704015 ~ 27704232 (+)
G788588 NA non-coding downstream 123543 27708311 ~ 27708510 (+)
G788596 NA non-coding downstream 129737 27714505 ~ 27714714 (+)
G788605 NA non-coding downstream 134777 27719545 ~ 27719913 (+)
G787022 LOC106577527 other upstream 204799 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1170931 26413112 ~ 26413532 (+)
G786218 NA other upstream 1625596 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 1841554 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 1755213 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 2697907 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 4011228 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 4168567 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 4537914 32122682 ~ 32124851 (+)

Expression


Co-expression Network