G788605


Basic Information

Item Value
gene id G788605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 27719545 ~ 27719913 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU898013
cctgatcaccgacaatgatgagacaccctatagggaggaggtcagagacctggcagtgtggtgccaggacaacaacctctccctcaatgtgagcaagacaaaggagctgatcgtggactagggctgaagtggagcaggtcgagagtttccagttccttggtgtccacatcaccaacgaactatcatggtccaaacacaccaagatagtcgtgaagagggcacgacaacaccttttccccctcaggagactgacaagatttggcatgggtcctcagatcctcaaaaacttctacagctgcaccattgagagcattctgaccggttacatcaccgcttggtatggcaactgctgggCAGctgactgcaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU898013 True 369 lncRNA 0.52 1 27719545 27719913

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-34 NA coding upstream 60989 27658481 ~ 27658556 (+)
LOC110531865 LOC106577518 coding upstream 72180 27633636 ~ 27647365 (+)
LOC110531863 LOC100695098 coding upstream 119948 27588954 ~ 27599597 (+)
LOC110533009 NA coding upstream 141230 27575441 ~ 27578315 (+)
LOC110531861 LOC106608584 coding upstream 158020 27494465 ~ 27561525 (+)
LOC110531867 LOC106577513 coding downstream 48723 27768636 ~ 27772723 (+)
ank2b LOC103361685 coding downstream 275966 27995879 ~ 28163412 (+)
LOC110531872 LOC106577502 coding downstream 611893 28331806 ~ 28340457 (+)
LOC110531876 LOC106577496 coding downstream 728349 28448262 ~ 28548376 (+)
LOC118966204 NA coding downstream 777304 28497217 ~ 28497272 (+)
G788596 NA non-coding upstream 4831 27714505 ~ 27714714 (+)
G788588 NA non-coding upstream 11035 27708311 ~ 27708510 (+)
G788583 NA non-coding upstream 15313 27704015 ~ 27704232 (+)
G787118 NA non-coding upstream 95775 27620977 ~ 27623770 (+)
G787107 NA non-coding upstream 134777 27584463 ~ 27584768 (+)
G788638 NA non-coding downstream 20668 27740581 ~ 27740834 (+)
G788640 NA non-coding downstream 23032 27742945 ~ 27743170 (+)
G788641 NA non-coding downstream 23694 27743607 ~ 27743847 (+)
G788657 NA non-coding downstream 34137 27754050 ~ 27754323 (+)
G788661 NA non-coding downstream 35269 27755182 ~ 27755402 (+)
taf6l taf6l other upstream 232022 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 339881 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1306013 26413112 ~ 26413532 (+)
G786218 NA other upstream 1760678 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 1976636 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 1620068 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 2562762 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 3876083 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 4033422 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 4402769 32122682 ~ 32124851 (+)

Expression


Co-expression Network