G788640


Basic Information

Item Value
gene id G788640
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 27742945 ~ 27743170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU898048
GATGCTGTGGGCAGAATAACAACTGGCGGATGCTCAATCTGATGTCGATGCTCGTCTCTATGGGTTACTTTACCCAAGTTGAGCAGAAGTTCATGGTCTCTGGTCATTCTTTTCTTCCTTGTGATCGATCTTTTGCCACCATCGAGAAGAGGCGCAAGGTGTCAGTCCTTCATACACCTGATTATGTTTCAAAGATGATACTTGAAGCACAACCAGCAAAACCATT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561952 isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU898048 True 226 lncRNA 0.45 1 27742945 27743170

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-34 NA coding upstream 84389 27658481 ~ 27658556 (+)
LOC110531865 LOC106577518 coding upstream 95580 27633636 ~ 27647365 (+)
LOC110531863 LOC100695098 coding upstream 143348 27588954 ~ 27599597 (+)
LOC110533009 NA coding upstream 164630 27575441 ~ 27578315 (+)
LOC110531861 LOC106608584 coding upstream 181420 27494465 ~ 27561525 (+)
LOC110531867 LOC106577513 coding downstream 25466 27768636 ~ 27772723 (+)
ank2b LOC103361685 coding downstream 252709 27995879 ~ 28163412 (+)
LOC110531872 LOC106577502 coding downstream 588636 28331806 ~ 28340457 (+)
LOC110531876 LOC106577496 coding downstream 705092 28448262 ~ 28548376 (+)
LOC118966204 NA coding downstream 754047 28497217 ~ 28497272 (+)
G788638 NA non-coding upstream 2111 27740581 ~ 27740834 (+)
G788605 NA non-coding upstream 23032 27719545 ~ 27719913 (+)
G788596 NA non-coding upstream 28231 27714505 ~ 27714714 (+)
G788588 NA non-coding upstream 34435 27708311 ~ 27708510 (+)
G788583 NA non-coding upstream 38713 27704015 ~ 27704232 (+)
G788641 NA non-coding downstream 437 27743607 ~ 27743847 (+)
G788657 NA non-coding downstream 10880 27754050 ~ 27754323 (+)
G788661 NA non-coding downstream 12012 27755182 ~ 27755402 (+)
G788667 NA non-coding downstream 16312 27759482 ~ 27759700 (+)
G788671 NA non-coding downstream 18940 27762110 ~ 27762342 (+)
taf6l taf6l other upstream 255422 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 363281 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1329413 26413112 ~ 26413532 (+)
G786218 NA other upstream 1784078 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 2000036 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 1596811 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 2539505 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 3852826 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 4010165 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 4379512 32122682 ~ 32124851 (+)

Expression


Co-expression Network