G788671


Basic Information

Item Value
gene id G788671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 27762110 ~ 27762342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU898079
gtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgtccagcaacagccccaaaacatcactgctctagaggagatttgcatggaagaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaactttgacctctgtcattgccaacaaagggtatataacaaagtattgagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU898079 True 233 lncRNA 0.45 1 27762110 27762342

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-34 NA coding upstream 103554 27658481 ~ 27658556 (+)
LOC110531865 LOC106577518 coding upstream 114745 27633636 ~ 27647365 (+)
LOC110531863 LOC100695098 coding upstream 162513 27588954 ~ 27599597 (+)
LOC110533009 NA coding upstream 183795 27575441 ~ 27578315 (+)
LOC110531861 LOC106608584 coding upstream 200585 27494465 ~ 27561525 (+)
LOC110531867 LOC106577513 coding downstream 6294 27768636 ~ 27772723 (+)
ank2b LOC103361685 coding downstream 233537 27995879 ~ 28163412 (+)
LOC110531872 LOC106577502 coding downstream 569464 28331806 ~ 28340457 (+)
LOC110531876 LOC106577496 coding downstream 685920 28448262 ~ 28548376 (+)
LOC118966204 NA coding downstream 734875 28497217 ~ 28497272 (+)
G788667 NA non-coding upstream 2410 27759482 ~ 27759700 (+)
G788661 NA non-coding upstream 6708 27755182 ~ 27755402 (+)
G788657 NA non-coding upstream 7787 27754050 ~ 27754323 (+)
G788641 NA non-coding upstream 18263 27743607 ~ 27743847 (+)
G788640 NA non-coding upstream 18940 27742945 ~ 27743170 (+)
G788688 NA non-coding downstream 21725 27784067 ~ 27784274 (+)
G788693 NA non-coding downstream 26007 27788349 ~ 27788635 (+)
G788701 NA non-coding downstream 36854 27799196 ~ 27799737 (+)
G788753 NA non-coding downstream 57512 27819854 ~ 27867779 (+)
taf6l taf6l other upstream 274587 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 382446 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1348578 26413112 ~ 26413532 (+)
G786218 NA other upstream 1803243 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 2019201 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 1577639 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 2520333 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 3833654 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 3990993 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 4360340 32122682 ~ 32124851 (+)

Expression


Co-expression Network