G788771


Basic Information

Item Value
gene id G788771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 27831454 ~ 27831909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU898197
tctctctgtctctctgtctctctctctctctctctctctctctctctctctctctctctctgtctctctctctctctgtctctctctctctctgtctctctgtctctctgtctctctctctctctctctctctgtctctctgtctctctctctctctgtctctctctctctctgtctctctgtctctctctctctctctctctctctgtctctctgtctctctgtctctctgtctctctgtctctctgtctctctctctctctctctctctgtctctctgtctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU898197 True 286 lncRNA 0.50 2 27831454 27831909

Neighbor

gene id symbol gene type direction distance location
LOC110531867 LOC106577513 coding upstream 58731 27768636 ~ 27772723 (+)
trnaa-ugc-34 NA coding upstream 172898 27658481 ~ 27658556 (+)
LOC110531865 LOC106577518 coding upstream 184089 27633636 ~ 27647365 (+)
LOC110531863 LOC100695098 coding upstream 231857 27588954 ~ 27599597 (+)
LOC110533009 NA coding upstream 253139 27575441 ~ 27578315 (+)
ank2b LOC103361685 coding downstream 163970 27995879 ~ 28163412 (+)
LOC110531872 LOC106577502 coding downstream 499897 28331806 ~ 28340457 (+)
LOC110531876 LOC106577496 coding downstream 616353 28448262 ~ 28548376 (+)
LOC118966204 NA coding downstream 665308 28497217 ~ 28497272 (+)
LOC110531878 LOC106577495 coding downstream 721860 28553769 ~ 28663634 (+)
G788701 NA non-coding upstream 31717 27799196 ~ 27799737 (+)
G788693 NA non-coding upstream 42819 27788349 ~ 27788635 (+)
G788688 NA non-coding upstream 47180 27784067 ~ 27784274 (+)
G788671 NA non-coding upstream 69112 27762110 ~ 27762342 (+)
G788773 NA non-coding downstream 345017 28176926 ~ 28178077 (+)
G788762 NA non-coding downstream 346189 28178098 ~ 28184335 (+)
G788992 NA non-coding downstream 453342 28285251 ~ 28285462 (+)
G789292 NA non-coding downstream 461815 28293724 ~ 28294024 (+)
taf6l taf6l other upstream 343931 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 451790 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1417922 26413112 ~ 26413532 (+)
G786218 NA other upstream 1872587 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 2088545 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 1508072 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 2450766 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 3764087 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 3921426 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 4290773 32122682 ~ 32124851 (+)

Expression


Co-expression Network