G789294


Basic Information

Item Value
gene id G789294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 28341665 ~ 28342025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU898769
cattttggaaaaagtcaaggggtctgaatactttccaaaggcactgtgtgtatataaatAATCCTTTTACACTGATTATTCTGTCCTGTCTTTTTCTCTGTTTTATTGGGATACTTTGTTCTTCCTGGCTCGCTGCTTTGATGTAAATATTGCCTGTAAGTGGTTACTGATCCACTTTGCCTTCATTTTTTTTCTTGTCCTCTATCCAGTTCTGAGCCTCTCTGTTTTAGTAGCTAGTGGTTTGTGTTGTATTTTTAAGAAATATTCCTGAAATGTGTCCATTTGATCGTCCTCAAGTCTGATCTGTGTGTTACTACTGCAATTGCCCAGAAGGTGGCAAAGTaacacgtttttttttatt

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU898769 True 361 lncRNA 0.37 1 28341665 28342025

Neighbor

gene id symbol gene type direction distance location
LOC110531872 LOC106577502 coding upstream 1208 28331806 ~ 28340457 (+)
ank2b LOC103361685 coding upstream 181411 27995879 ~ 28163412 (+)
LOC110531867 LOC106577513 coding upstream 568942 27768636 ~ 27772723 (+)
trnaa-ugc-34 NA coding upstream 683109 27658481 ~ 27658556 (+)
LOC110531865 LOC106577518 coding upstream 694300 27633636 ~ 27647365 (+)
LOC110531876 LOC106577496 coding downstream 106237 28448262 ~ 28548376 (+)
LOC118966204 NA coding downstream 155192 28497217 ~ 28497272 (+)
LOC110531878 LOC106577495 coding downstream 211744 28553769 ~ 28663634 (+)
LOC118966022 NA coding downstream 551023 28893048 ~ 28894058 (+)
LOC110531882 LOC106577492 coding downstream 694430 29036455 ~ 29039588 (+)
G789313 NA non-coding upstream 10353 28331029 ~ 28331312 (+)
G789312 NA non-coding upstream 10659 28330732 ~ 28331006 (+)
G789311 NA non-coding upstream 11351 28330019 ~ 28330314 (+)
G789310 NA non-coding upstream 11790 28329672 ~ 28329875 (+)
G789289 NA non-coding upstream 46624 28294428 ~ 28295041 (+)
G789323 NA non-coding downstream 11942 28353967 ~ 28358180 (+)
G789339 NA non-coding downstream 39106 28381131 ~ 28383324 (+)
G789472 zcchc4 non-coding downstream 94563 28436588 ~ 28437550 (+)
G789481 NA non-coding downstream 105102 28447127 ~ 28447334 (+)
G789493 NA non-coding downstream 189788 28531813 ~ 28539147 (+)
taf6l taf6l other upstream 854142 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 962001 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1928133 26413112 ~ 26413532 (+)
G786218 NA other upstream 2382798 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 2598756 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 997956 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 1940650 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 3253971 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 3411310 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 3780657 32122682 ~ 32124851 (+)

Expression


Co-expression Network