G789436


Basic Information

Item Value
gene id G789436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 28382749 ~ 28383538 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU898932
GGACACTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGATGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGACTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGACTATGGAAACTAGTACATAGAGTAATATGACTGCTGATGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGACTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTGTGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAGCTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTATGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTGTGGAAACTAGTACATAGAGTAATATGACTGCTGGTGGCTGTGGAAACTAGTACATAGAGTAATATGACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU898932 True 670 lncRNA 0.40 2 28382749 28383538

Neighbor

gene id symbol gene type direction distance location
LOC110531871 LOC106577503 coding downstream 72142 28294175 ~ 28310607 (-)
camk2d1 LOC106577507 coding downstream 99289 28163668 ~ 28283460 (-)
LOC110531868 LOC106577509 coding downstream 485911 27894036 ~ 27896838 (-)
chi chi coding downstream 510378 27867348 ~ 27872371 (-)
LOC100136672 sstr1b coding downstream 548335 27821574 ~ 27834414 (-)
LOC110531875 zcchc4 coding upstream 53003 28436541 ~ 28443621 (-)
LOC110531879 LOC106577493 coding upstream 283701 28667239 ~ 28993223 (-)
LOC110531880 NA coding upstream 580906 28964444 ~ 28966956 (-)
LOC110531881 LOC106577491 coding upstream 659037 29042575 ~ 29045196 (-)
LOC110531883 LOC106577489 coding upstream 686509 29070047 ~ 29139723 (-)
G789435 NA non-coding downstream 319 28381856 ~ 28382430 (-)
G789433 NA non-coding downstream 1345 28380379 ~ 28381404 (-)
G789403 NA non-coding downstream 54577 28327859 ~ 28328172 (-)
G789397 NA non-coding downstream 67702 28314827 ~ 28315047 (-)
G789268 NA non-coding downstream 116499 28265788 ~ 28266250 (-)
G789803 NA non-coding upstream 71394 28454932 ~ 28552172 (-)
G789856 NA non-coding upstream 133498 28517036 ~ 28517566 (-)
G789862 NA non-coding upstream 153345 28536883 ~ 28537548 (-)
G789945 NA non-coding upstream 279913 28663451 ~ 28666058 (-)
G789967 NA non-coding upstream 302527 28686065 ~ 28688698 (-)
G789228 LOC106577504 other downstream 235770 28145220 ~ 28146979 (-)
G788495 NA other downstream 819224 27563162 ~ 27563525 (-)
G788408 LOC106577523 other downstream 914427 27463292 ~ 27468322 (-)
LOC110531854 LOC106577527 other downstream 1001460 27376312 ~ 27381485 (-)
G789863 LOC100194703 other upstream 145282 28528820 ~ 28652471 (-)
G790535 NA other upstream 665360 29048898 ~ 29049244 (-)
G790551 NA other upstream 685314 29068852 ~ 29069187 (-)

Expression


Co-expression Network