G789856


Basic Information

Item Value
gene id G789856
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 28517036 ~ 28517566 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU899392
TTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATAAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATAAGTAGGCATTTTGGTTTTGAATTATAAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATAAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATAAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGAATTATGAGTATTCATTTTGGTTTTGAATTAGGAGTAGGCATTTTGGTTTTGAATTATGAGTAGGCATTTTGGTTTTGCATTTTCTATGGACGAGGCTTTGTCA

Function

NR:

description
PREDICTED: proline-rich extensin-like protein EPR1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU899392 True 505 lncRNA 0.30 2 28517036 28517566

Neighbor

gene id symbol gene type direction distance location
LOC110531875 zcchc4 coding downstream 73415 28436541 ~ 28443621 (-)
LOC110531873 LOC106577501 coding downstream 85030 28342139 ~ 28432006 (-)
LOC110531871 LOC106577503 coding downstream 206429 28294175 ~ 28310607 (-)
camk2d1 LOC106577507 coding downstream 233576 28163668 ~ 28283460 (-)
LOC110531868 LOC106577509 coding downstream 620198 27894036 ~ 27896838 (-)
LOC110531879 LOC106577493 coding upstream 149673 28667239 ~ 28993223 (-)
LOC110531880 NA coding upstream 446878 28964444 ~ 28966956 (-)
LOC110531881 LOC106577491 coding upstream 525009 29042575 ~ 29045196 (-)
LOC110531883 LOC106577489 coding upstream 552481 29070047 ~ 29139723 (-)
LOC110531884 LOC106577488 coding upstream 622784 29140350 ~ 29174588 (-)
G789436 NA non-coding downstream 133498 28382749 ~ 28383538 (-)
G789435 NA non-coding downstream 134606 28381856 ~ 28382430 (-)
G789433 NA non-coding downstream 135632 28380379 ~ 28381404 (-)
G789403 NA non-coding downstream 188864 28327859 ~ 28328172 (-)
G789397 NA non-coding downstream 201989 28314827 ~ 28315047 (-)
G789862 NA non-coding upstream 19317 28536883 ~ 28537548 (-)
G789945 NA non-coding upstream 145885 28663451 ~ 28666058 (-)
G789967 NA non-coding upstream 168499 28686065 ~ 28688698 (-)
G789968 NA non-coding upstream 171803 28689369 ~ 28690678 (-)
G790037 NA non-coding upstream 305167 28822733 ~ 28823470 (-)
G789228 LOC106577504 other downstream 370057 28145220 ~ 28146979 (-)
LOC100136672 sstr1b other downstream 682772 27821574 ~ 27834414 (-)
G788495 NA other downstream 953511 27563162 ~ 27563525 (-)
G788408 LOC106577523 other downstream 1048714 27463292 ~ 27468322 (-)
LOC110531854 LOC106577527 other downstream 1135747 27376312 ~ 27381485 (-)
G789863 LOC100194703 other upstream 11254 28528820 ~ 28652471 (-)
G790535 NA other upstream 531332 29048898 ~ 29049244 (-)
G790551 NA other upstream 551286 29068852 ~ 29069187 (-)

Expression


Co-expression Network