Gene
RNA
| Item | Value |
|---|---|
| gene id | G790037 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 28822733 ~ 28823470 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| vegetative cell wall protein gp1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU899597 | True | 419 | lncRNA | 0.41 | 2 | 28822733 | 28823470 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531875 | zcchc4 | coding | downstream | 379112 | 28436541 ~ 28443621 (-) |
| LOC110531873 | LOC106577501 | coding | downstream | 390727 | 28342139 ~ 28432006 (-) |
| LOC110531871 | LOC106577503 | coding | downstream | 512126 | 28294175 ~ 28310607 (-) |
| camk2d1 | LOC106577507 | coding | downstream | 539273 | 28163668 ~ 28283460 (-) |
| LOC110531868 | LOC106577509 | coding | downstream | 925895 | 27894036 ~ 27896838 (-) |
| LOC110531880 | NA | coding | upstream | 140974 | 28964444 ~ 28966956 (-) |
| LOC110531881 | LOC106577491 | coding | upstream | 219105 | 29042575 ~ 29045196 (-) |
| LOC110531883 | LOC106577489 | coding | upstream | 246577 | 29070047 ~ 29139723 (-) |
| LOC110531884 | LOC106577488 | coding | upstream | 316880 | 29140350 ~ 29174588 (-) |
| LOC110531887 | LOC106577486 | coding | upstream | 520911 | 29344381 ~ 29353599 (-) |
| G789968 | NA | non-coding | downstream | 132055 | 28689369 ~ 28690678 (-) |
| G789967 | NA | non-coding | downstream | 134035 | 28686065 ~ 28688698 (-) |
| G789945 | NA | non-coding | downstream | 156675 | 28663451 ~ 28666058 (-) |
| G789803 | NA | non-coding | downstream | 270561 | 28454932 ~ 28552172 (-) |
| G790120 | LOC106575828 | non-coding | upstream | 111947 | 28935417 ~ 28939614 (-) |
| G790515 | NA | non-coding | upstream | 184508 | 29007978 ~ 29008204 (-) |
| G790525 | NA | non-coding | upstream | 203040 | 29026510 ~ 29026713 (-) |
| G790529 | NA | non-coding | upstream | 208976 | 29032446 ~ 29032737 (-) |
| G790509 | LOC106577492 | non-coding | upstream | 214750 | 29038220 ~ 29039574 (-) |
| G789863 | LOC100194703 | other | downstream | 170262 | 28528820 ~ 28652471 (-) |
| G789228 | LOC106577504 | other | downstream | 675754 | 28145220 ~ 28146979 (-) |
| LOC100136672 | sstr1b | other | downstream | 988469 | 27821574 ~ 27834414 (-) |
| G788495 | NA | other | downstream | 1259208 | 27563162 ~ 27563525 (-) |
| G790535 | NA | other | upstream | 225428 | 29048898 ~ 29049244 (-) |
| G790551 | NA | other | upstream | 245382 | 29068852 ~ 29069187 (-) |
| G790598 | NA | other | upstream | 307904 | 29131374 ~ 29149017 (-) |
| G792267 | NA | other | upstream | 1491840 | 30315310 ~ 30357964 (-) |
