G790172


Basic Information

Item Value
gene id G790172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 29015166 ~ 29020160 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU899736
agtgtcatgttgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgtgttaggttaccttttctcccccgctttcccccagctgtcccttgtctcctctaactacccattcaccccgttccccacctgttcccttttttccctctgattaggtccctatatctctctctgtttctgctcctgtccttgtcggattcttgtttgtttgtgtcattcatgcctgaaccagactgtcgtcatgtttgctgtaaccttgtcctgtcctgtcggaatctgccggcccatctgagcctacctatgtttggtaattaaagaagctctgtttaagttgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU899736 True 344 lncRNA 0.49 2 29015166 29020160

Neighbor

gene id symbol gene type direction distance location
LOC118966022 NA coding upstream 121108 28893048 ~ 28894058 (+)
LOC110531878 LOC106577495 coding upstream 351532 28553769 ~ 28663634 (+)
LOC110531876 LOC106577496 coding upstream 466790 28448262 ~ 28548376 (+)
LOC118966204 NA coding upstream 517894 28497217 ~ 28497272 (+)
LOC110531872 LOC106577502 coding upstream 674709 28331806 ~ 28340457 (+)
LOC110531882 LOC106577492 coding downstream 16295 29036455 ~ 29039588 (+)
rbpjb LOC106577485 coding downstream 227967 29248127 ~ 29342203 (+)
tbc1d19 tbc1d19 coding downstream 333956 29354116 ~ 29381669 (+)
stim2b LOC106577483 coding downstream 362932 29383092 ~ 29473789 (+)
LOC110531891 NA coding downstream 1262477 30282637 ~ 30288163 (+)
G790159 NA non-coding upstream 16387 28998579 ~ 28998779 (+)
G789754 NA non-coding upstream 18866 28923955 ~ 28996300 (+)
G789629 NA non-coding upstream 314269 28696693 ~ 28700897 (+)
G789485 NA non-coding upstream 344881 28667262 ~ 28670285 (+)
G789493 NA non-coding upstream 476019 28531813 ~ 28539147 (+)
G790176 NA non-coding downstream 5238 29025398 ~ 29025622 (+)
G790177 NA non-coding downstream 6551 29026711 ~ 29026960 (+)
G790181 NA non-coding downstream 12344 29032504 ~ 29032733 (+)
G790185 LOC106577491 non-coding downstream 24676 29044836 ~ 29045124 (+)
G790189 NA non-coding downstream 27509 29047669 ~ 29047876 (+)
taf6l taf6l other upstream 1527643 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 1635502 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 2601634 26413112 ~ 26413532 (+)
G786218 NA other upstream 3056299 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 3272257 25712997 ~ 25742909 (+)
G793757 LOC107579696 other downstream 2575836 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 2733175 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 3102522 32122682 ~ 32124851 (+)

Expression


Co-expression Network