G790181


Basic Information

Item Value
gene id G790181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 29032504 ~ 29032733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU899745
tgtgttatatttctaggtgtttggcctggtatggttcccaatcagaggcagctgtcaatcgttgtctctgattgagaaccatacttaggcagcctgttttcccactatgggttgtgggtagttgttttccgtttcagtgtttgcaccatatGGGACTATTTCGGTTTTCATTtcttctcttgttcttttgtatttagtgttcagttaattaaaggaaatatgaacacgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU899745 True 230 lncRNA 0.40 1 29032504 29032733

Neighbor

gene id symbol gene type direction distance location
LOC118966022 NA coding upstream 138446 28893048 ~ 28894058 (+)
LOC110531878 LOC106577495 coding upstream 368870 28553769 ~ 28663634 (+)
LOC110531876 LOC106577496 coding upstream 484128 28448262 ~ 28548376 (+)
LOC118966204 NA coding upstream 535232 28497217 ~ 28497272 (+)
LOC110531872 LOC106577502 coding upstream 692047 28331806 ~ 28340457 (+)
LOC110531882 LOC106577492 coding downstream 3722 29036455 ~ 29039588 (+)
rbpjb LOC106577485 coding downstream 215394 29248127 ~ 29342203 (+)
tbc1d19 tbc1d19 coding downstream 321383 29354116 ~ 29381669 (+)
stim2b LOC106577483 coding downstream 350359 29383092 ~ 29473789 (+)
LOC110531891 NA coding downstream 1249904 30282637 ~ 30288163 (+)
G790177 NA non-coding upstream 5544 29026711 ~ 29026960 (+)
G790176 NA non-coding upstream 6882 29025398 ~ 29025622 (+)
G790172 NA non-coding upstream 12344 29015166 ~ 29020160 (+)
G790159 NA non-coding upstream 33725 28998579 ~ 28998779 (+)
G789754 NA non-coding upstream 36204 28923955 ~ 28996300 (+)
G790185 LOC106577491 non-coding downstream 12103 29044836 ~ 29045124 (+)
G790189 NA non-coding downstream 14936 29047669 ~ 29047876 (+)
G790190 NA non-coding downstream 15186 29047919 ~ 29048123 (+)
G790191 NA non-coding downstream 15950 29048683 ~ 29048906 (+)
G790196 NA non-coding downstream 24781 29057514 ~ 29057801 (+)
taf6l taf6l other upstream 1544981 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 1652840 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 2618972 26413112 ~ 26413532 (+)
G786218 NA other upstream 3073637 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 3289595 25712997 ~ 25742909 (+)
G793757 LOC107579696 other downstream 2563263 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 2720602 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 3089949 32122682 ~ 32124851 (+)

Expression


Co-expression Network