XLOC_002705



Basic Information


Item Value
gene id XLOC_002705
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 19931298 ~ 19996731 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006032
CAGTACAGCTCAAAAACAGCATTACTAATGACAATCCAATCTAAACGGACAGAATGGATTTGAATggaatttaaatatatgtaaaattctTCAAAGCATGTGCATCCAGAGGTTAGGAGAAACACCCATGGGAGAAGGGAAACATCCACGGAAGAAGGCGAGTAGGGGAGAAGGTGAGGTGAACCATCTGTCTTCGATTCCAGCCAATGTACAACtggaaaagATGTGTGACCATTGGAGAAGGAAACTGTCACATCATTGTGACACCACTGCGCACCAATCAGAGGAGCTGATCCATCGCAACAAAAAGACATTTGCTTGCACTGATCGAAAGGAGCGCCTGATTCAACACCAAACATTCCTCACACTCATGCGCATCGTGCCAACCACAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006032 True 392 lncRNA 0.45 3 19931298 19996731

Neighbor


gene id symbol gene type direction distance location
XLOC_002704 gfra2b coding downstream 129477 19723025 ~ 19801821 (-)
XLOC_002702 si:ch211-127i16.2 coding downstream 407546 19427474 ~ 19523752 (-)
XLOC_002703 NA coding downstream 409594 19518885 ~ 19521704 (-)
XLOC_002701 NA coding downstream 838692 19088996 ~ 19092606 (-)
XLOC_002700 adra1ab coding downstream 919364 18999841 ~ 19011934 (-)
XLOC_002706 NA coding upstream 37169 20033900 ~ 20065149 (-)
XLOC_002707 pbdc1 coding upstream 106336 20103067 ~ 20106012 (-)
XLOC_002708 CR450836.1 coding upstream 147066 20143797 ~ 20151328 (-)
XLOC_002709 htr7b coding upstream 162107 20158838 ~ 20175118 (-)
XLOC_002710 NA coding upstream 237283 20234014 ~ 20236971 (-)
XLOC_002698 NA non-coding downstream 1644355 18284414 ~ 18286943 (-)
XLOC_002697 NA non-coding downstream 1648342 18274014 ~ 18282956 (-)
XLOC_002695 NA non-coding downstream 2019759 17900311 ~ 17911539 (-)
XLOC_002714 NA non-coding upstream 451908 20448639 ~ 20456007 (-)
XLOC_002716 BX294119.1 non-coding upstream 487083 20483814 ~ 20483930 (-)
XLOC_002720 NA non-coding upstream 620045 20616776 ~ 20618813 (-)

Expression



Co-expression Network