G790214


Basic Information

Item Value
gene id G790214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 29085649 ~ 29085876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU899778
GTCAGGTTCAAATCAACCTATCATATCATAATTTCTGAGTAGGCGGTAATGACATTTTTCATTGTGCTGTAACTGAAACTAGAAGATCTTCTGACATCCTTTCCCTTCGCCAAAGGTACGGAAcggatttttaaaaaaaagtgtttttaccCTGGGATAGCTCGCTAATATGACCCATAGTAGGGAAAAACATTTCTTGGTTGCAATTCGATCTACAGTACATCTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU899778 True 228 lncRNA 0.38 1 29085649 29085876

Neighbor

gene id symbol gene type direction distance location
LOC110531882 LOC106577492 coding upstream 46061 29036455 ~ 29039588 (+)
LOC118966022 NA coding upstream 191591 28893048 ~ 28894058 (+)
LOC110531878 LOC106577495 coding upstream 422015 28553769 ~ 28663634 (+)
LOC110531876 LOC106577496 coding upstream 537273 28448262 ~ 28548376 (+)
rbpjb LOC106577485 coding downstream 162251 29248127 ~ 29342203 (+)
tbc1d19 tbc1d19 coding downstream 268240 29354116 ~ 29381669 (+)
stim2b LOC106577483 coding downstream 297216 29383092 ~ 29473789 (+)
LOC110531891 NA coding downstream 1196761 30282637 ~ 30288163 (+)
LOC110531892 LOC106577482 coding downstream 1288495 30374371 ~ 30598347 (+)
G790211 LOC106577489 non-coding upstream 5579 29079844 ~ 29080070 (+)
G790206 LOC106577489 non-coding upstream 12622 29072776 ~ 29073027 (+)
G790205 NA non-coding upstream 13251 29070129 ~ 29072398 (+)
G790198 NA non-coding upstream 26418 29058987 ~ 29059231 (+)
G790196 NA non-coding upstream 27848 29057514 ~ 29057801 (+)
G790493 NA non-coding downstream 457143 29543019 ~ 29543870 (+)
G790888 NA non-coding downstream 483971 29569847 ~ 29570077 (+)
G790913 NA non-coding downstream 503368 29589244 ~ 29589523 (+)
G790918 LOC100136012 non-coding downstream 506369 29592245 ~ 29592728 (+)
taf6l taf6l other upstream 1598126 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 1705985 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 2672117 26413112 ~ 26413532 (+)
G786218 NA other upstream 3126782 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 3342740 25712997 ~ 25742909 (+)
G793757 LOC107579696 other downstream 2510120 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 2667459 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 3036806 32122682 ~ 32124851 (+)

Expression


Co-expression Network