Gene
RNA
| Item | Value |
|---|---|
| gene id | G790716 |
| gene name | LOC106577485 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 29325516 ~ 29328373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: recombining binding protein suppressor of hairless isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU900314 | True | 308 | lncRNA | 0.52 | 2 | 29325516 | 29328373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531884 | LOC106577488 | coding | downstream | 150928 | 29140350 ~ 29174588 (-) |
| LOC110531883 | LOC106577489 | coding | downstream | 185793 | 29070047 ~ 29139723 (-) |
| LOC110531881 | LOC106577491 | coding | downstream | 280320 | 29042575 ~ 29045196 (-) |
| LOC110531879 | LOC106577493 | coding | downstream | 332293 | 28667239 ~ 28993223 (-) |
| LOC110531880 | NA | coding | downstream | 358560 | 28964444 ~ 28966956 (-) |
| LOC110531887 | LOC106577486 | coding | upstream | 16008 | 29344381 ~ 29353599 (-) |
| LOC110532982 | NA | coding | upstream | 1031434 | 30359807 ~ 30360792 (-) |
| LOC118965933 | NA | coding | upstream | 1504353 | 30832726 ~ 30834388 (-) |
| LOC118965934 | LOC106595224 | coding | upstream | 1709705 | 31038078 ~ 31040215 (-) |
| LOC110531151 | NA | coding | upstream | 2041110 | 31369483 ~ 31494494 (-) |
| G790573 | NA | non-coding | downstream | 189076 | 29104062 ~ 29136440 (-) |
| G790556 | NA | non-coding | downstream | 247482 | 29077824 ~ 29078034 (-) |
| G790542 | NA | non-coding | downstream | 267600 | 29057637 ~ 29057916 (-) |
| G790541 | NA | non-coding | downstream | 267935 | 29057348 ~ 29057581 (-) |
| G790724 | LOC106602727 | non-coding | upstream | 3917 | 29332290 ~ 29332787 (-) |
| G790731 | NA | non-coding | upstream | 9393 | 29337766 ~ 29339792 (-) |
| G790732 | NA | non-coding | upstream | 11510 | 29339883 ~ 29342202 (-) |
| G790762 | NA | non-coding | upstream | 54882 | 29383255 ~ 29383467 (-) |
| G790852 | NA | non-coding | upstream | 187339 | 29515712 ~ 29527428 (-) |
| G790598 | NA | other | downstream | 176499 | 29131374 ~ 29149017 (-) |
| G790551 | NA | other | downstream | 256329 | 29068852 ~ 29069187 (-) |
| G790535 | NA | other | downstream | 276272 | 29048898 ~ 29049244 (-) |
| G789945 | NA | other | downstream | 659458 | 28663451 ~ 28666058 (-) |
| G792267 | NA | other | upstream | 986937 | 30315310 ~ 30357964 (-) |
| G793472 | NA | other | upstream | 2075109 | 31403482 ~ 31403869 (-) |
| G793489 | NA | other | upstream | 2090082 | 31418455 ~ 31418973 (-) |
| G793842 | NA | other | upstream | 2332866 | 31661239 ~ 31662198 (-) |
| G794311 | LOC106577443 | other | upstream | 2697698 | 32026071 ~ 32028445 (-) |
