G790493


Basic Information

Item Value
gene id G790493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 29543019 ~ 29543870 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU900086
AATATTCTGATGGATACGCATTGTTTtcatgatttcattatgtccatttgtttatgttttcttacttttgcaaagtcactgtgcatttgcaatatggttcaatgggcaggtaccatcacgaatttgtcatgctataaaaatcctgcaggaatgtgaaattgactggcccgatgaactcgggatggctgggcagtgattctggttcatctcaatcgctcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU900086 True 220 lncRNA 0.40 2 29543019 29543870

Neighbor

gene id symbol gene type direction distance location
stim2b LOC106577483 coding upstream 69230 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 161350 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 202666 29248127 ~ 29342203 (+)
LOC110531882 LOC106577492 coding upstream 503431 29036455 ~ 29039588 (+)
LOC118966022 NA coding upstream 648961 28893048 ~ 28894058 (+)
LOC110531891 NA coding downstream 738767 30282637 ~ 30288163 (+)
LOC110531892 LOC106577482 coding downstream 830501 30374371 ~ 30598347 (+)
LOC110531915 LOC106595846 coding downstream 2209312 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 2356190 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 2458996 32002866 ~ 32027214 (+)
G790214 NA non-coding upstream 457143 29085649 ~ 29085876 (+)
G790211 LOC106577489 non-coding upstream 462949 29079844 ~ 29080070 (+)
G790206 LOC106577489 non-coding upstream 469992 29072776 ~ 29073027 (+)
G790205 NA non-coding upstream 470621 29070129 ~ 29072398 (+)
G790888 NA non-coding downstream 25977 29569847 ~ 29570077 (+)
G790913 NA non-coding downstream 45374 29589244 ~ 29589523 (+)
G790918 LOC100136012 non-coding downstream 48375 29592245 ~ 29592728 (+)
G790932 NA non-coding downstream 57347 29601217 ~ 29601417 (+)
G790985 NA non-coding downstream 97743 29641613 ~ 29641894 (+)
taf6l taf6l other upstream 2055496 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 2163355 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 3129487 26413112 ~ 26413532 (+)
G786218 NA other upstream 3584152 25874527 ~ 25958867 (+)
G793757 LOC107579696 other downstream 2052126 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 2578812 32122682 ~ 32124851 (+)
G794892 NA other downstream 2957977 32501847 ~ 32502355 (+)

Expression


Co-expression Network