G791000


Basic Information

Item Value
gene id G791000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 29652686 ~ 29652907 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU900611
gattgaatggttagcttcaacaaagtgagctgctactggatagtcaatgttcttacacctgattgagctgcCGTGTTCAGCTATGTGTTGTTTTAATTGTCTTATCGTTTGTCCTACGTCAGCTTTTCCACACACTTTTCCACATGAACAGAGTTAGAATACTCCCTTGGTCTTGCATACCACTAACAGGGTTCTTTTGAtctgtatgtgggtgtctgaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU900611 True 222 lncRNA 0.41 1 29652686 29652907

Neighbor

gene id symbol gene type direction distance location
stim2b LOC106577483 coding upstream 178897 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 271017 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 312333 29248127 ~ 29342203 (+)
LOC110531882 LOC106577492 coding upstream 613098 29036455 ~ 29039588 (+)
LOC118966022 NA coding upstream 758628 28893048 ~ 28894058 (+)
LOC110531891 NA coding downstream 629730 30282637 ~ 30288163 (+)
LOC110531892 LOC106577482 coding downstream 721464 30374371 ~ 30598347 (+)
LOC110531915 LOC106595846 coding downstream 2100275 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 2247153 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 2349959 32002866 ~ 32027214 (+)
G790999 NA non-coding upstream 5 29652472 ~ 29652681 (+)
G790985 NA non-coding upstream 10792 29641613 ~ 29641894 (+)
G790932 NA non-coding upstream 51269 29601217 ~ 29601417 (+)
G790918 LOC100136012 non-coding upstream 59958 29592245 ~ 29592728 (+)
G790913 NA non-coding upstream 63163 29589244 ~ 29589523 (+)
G791007 NA non-coding downstream 4283 29657190 ~ 29657392 (+)
G791008 NA non-coding downstream 5284 29658191 ~ 29658458 (+)
G791061 NA non-coding downstream 41378 29694285 ~ 29694508 (+)
G791063 NA non-coding downstream 42291 29695198 ~ 29695450 (+)
G791069 NA non-coding downstream 47079 29699986 ~ 29700284 (+)
taf6l taf6l other upstream 2165163 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 2273022 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 3239154 26413112 ~ 26413532 (+)
G786218 NA other upstream 3693819 25874527 ~ 25958867 (+)
G793757 LOC107579696 other downstream 1943089 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 2469775 32122682 ~ 32124851 (+)
G794892 NA other downstream 2848940 32501847 ~ 32502355 (+)

Expression


Co-expression Network