XLOC_027055 (mapk11)


Basic Information

Item Value
gene id XLOC_027055
gene name mapk11
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 5506946 ~ 5522437 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053335
AAGAAGAGAGACTGAAGCCGGCTGCCTCCACGCACAGGCACATCCCTTTGGCGGATGCGTTAGTGTTTTCCTTACACTTTTACAGTAAAGAGCGTCTTTTTAAACGGAAAACATGGCGACAAGACCGGGATTCTACCGGCAAGAATTAAACAAGACTGTCTGGGAGGTGCCAGAACGATACCAGAACCTTACACCGGTTGGATCGGGGGCATATGGCTCAGTATGCTCAGCATATGACGTGCGCCTTCGTCAGAAAGTGGCCGTGAAGAAGCTCTCCAGGCCTTTCCAGTCCCTCATCCACAGCAGAAGAACATACAGAGAACTGAGACTACTCAAACACATGAAGCACGAGAATGTTAGTCCCTCAAGACACCCATAAACATGTAATTACATGAACACAGGGGAGTAAACAAATACTGAAGGTCCATTCCTATAATATAAACCGCTAGACAGCTAACAGGGAACATTCTTCGATCTTTAGTAGGGCCAGAAAACAATCTACAGACTTTTTTTGCTGTTTAATTTTGCTATTCATTTgctcattttgtaaaaaaaaaaa
>TCONS_00053336
AGAGACTGAAGCCGGCTGCCTCCACGCACAGGCACATCCCTTTGGCGGATGCGTTAGTGTTTTCCTTACACTTTTACAGTAAAGAGCGTCTTTTTAAACGGAAAACATGGCGACAAGACCGGGATTCTACCGGCAAGAATTAAACAAGACTGTCTGGGAGGTGCCAGAACGATACCAGAACCTTACACCGGTTGGATCGGGGGCATATGGCTCAGTATGGTGAGTCCAGCAGCTCAGCATATGACGTGCGCCTTCGTCAGAAAGTGGCCGTGAAGAAGCTCTCCAGGCCTTTCCAGTCCCTCATCCACAGCAGAAGAACATACAGAGAACTGAGACTACTCAAACACATGAAGCACGAGAATGTTATTGGACTGCTGGACGTTTTCACTCCGGCAGCTTCTCTCGAGGAATTCAATGAGCTATCTAGTGACCAATCTGATGGGAGCAGATCTTAACAACATTGTCAAGTTTCAAAGACTTTCAGACGAACACGTACAATTCCTCATCTATCAGCTTCTTCGGGGCCTTAAGTACATCCATTCAGCTGGACTGATACACAGAG
>TCONS_00053337
AGAGACTGAAGCCGGCTGCCTCCACGCACAGGCACATCCCTTTGGCGGATGCGTTAGTGTTTTCCTTACACTTTTACAGTAAAGAGCGTCTTTTTAAACGGAAAACATGGCGACAAGACCGGGATTCTACCGGCAAGAATTAAACAAGACTGTCTGGGAGGTGCCAGAACGATACCAGAACCTTACACCGGTTGGATCGGGGGCATATGGCTCAGTATGCTCAGCATATGACGTGCGCCTTCGTCAGAAAGTGGCCGTGAAGAAGCTCTCCAGGCCTTTCCAGTCCCTCATCCACAGCAGAAGAACATACAGAGAACTGAGACTACTCAAACACATGAAGCACGAGAATGTTATTGGACTGCTGGACGTTTTCACTCCGGCAGCTTCTCTCGAGGAATTCAATGAGGTCTATCTAGTGACCAATCTGATGGGAGCAGATCTTAACAACATTGTCAAGTTTCAAAGACTTTCAGACGAACACGTACAATTCCTCATCTATCAGCTTCTTCGGGGCCTTAAGTACATCCATTCAGCTGGACTGATACACAGAGACTTAAAGCCAAGCAATGTAGCCGTGAATGAAGATTGTGAACTTAGGATCCTCGATTTTGGGTTGGCCAGACAAACAGATGATGAGATGACGGGCTATGTGGCGACTCGTTGGTACAGAGCACCAGAGATCATGCTTAACTGGATGCATTACAACCAGACAGTGGATATCTGGTCTGTCGGATGCATCATGGGTGAGCTTCTGAAGGGGAAGGTTTTGTTTCCTGGCAACGATTATATAGATCAGCTAAAGAGAATCATGGAGGTTGTAGGCACTCCAACCCCGGACGTATTGAAGAAGATATCTTCCGAACACGCTCAGAAGTACATCCAGTCTCTTCCGCACATGCCGCAGCAGGACCTGGGGAAGATATTTAGAGGGGCAAATCCACTGGCGGTTgatctgttgaaaaaaatgctGGTATTAGACTGTGATGGACGGATTTCCGCCAGTGAAGCGCTGTGCCATCCATACTTTTCCCAGTACCATGATCCAGAAGATGAACCAGAGGCACCTCCATACGATCAGACCCCTGAGAGCAAGGATCGCACAATGGAGGAGTGGAAGGAGCTAGTGTTTGAGGAAGTAAGCAATTTCAAAGATCCTCCCAATAAACCCGAAAGTCTTCAGGTTGAACAATAAAACTGAGCGCAACTACAATCCAGGACGATATACAGTACTGCCCTCTCCTTCTtttgaacatgcaaactacagGACTGGTGGACATAAGAACAGACTGCAGTTCAGCCAGACGAGACGATGACAATGTATTTCCAAGGCATGACGCCCTTCCTGTATGTGGCTGTGTGTTTGTACACTTAAGAGCAAAACATGACTGGTATTGTTGGACACAATGTATTGTAAAGTATTACAAAGTGCATgtcgcgtgtgtgcgtgcgtatgcGCAGAGTtgtgtgttttgagtgttttTATATTTGATGTGAGACAGGTTGGTGAAGCAGGGTATGGTGTCTTTCATATAAGACCAAAACAAACTAATAAGCCGGAGAAGCAGGCCGAGCTGGAGAGAAAATATGTTTACAATGTTGGACAGAGTGGGATGTGTGTCTTAAAACATTCATATATGCATCAGTGTACAAAAGTCTCTGCATAAAATTGAACCAGTTGCATAATCTGGCTTTACTCATTTCAAAGTTCTCTGAATATAACATACCTCgaatgcattgtgtgtgtgtttgtgtttgcagctGATTTGCACGTCAAGGGTGAAAATGAAAAAATAGAGATCATCCTAGAGTGCACAACACAATCAAATACCAAATCTTTCATCGCTAGTCAaatcctttttaaaattaatgactGAAATGAACTGTTAGTGTTGAACGGGTTTACGCTGCAATGGCATAAACTGAACAAGCAGTATTACAAATGGTTTTTCTTTTCTCAGGTTATGGACcaatttattgtaatatatatttccTGTCTATTTTCTCCGGTGGTTTAAGTCAGTATTTATATCTGTTTGGGTTAATCTCACAAATCTAAACTGTCAAGAACATGTTGGATCATCTTTCACCACAAAATTTTAAAGGAAATAATAAAATTTGCATGAAGAACA
>TCONS_00053338
ATGGCGACAAGACCGGGATTCTACCGGCAAGAATTAAACAAGACTGTCTGGGAGGTGCCAGAACGATACCAGAACCTTACACCGGTTGGATCGGGGGCATATGGCTCAGTATGCTCAGCATATGACGTGCGCCTTCGTCAGAAAGTGGCCGTGAAGAAGCTCTCCAGGCCTTTCCAGTCCCTCATCCACAGCAGAAGAACATACAGAGAACTGAGACTACTCAAACACATGAAGCACGAGAATGTTATTGGACTGCTGGACGTTTTCACTCCGGCAGCTTCTCTCGAGGAATTCAATGAGGTGTGAGTGTCTGCCTGGTGACAATATCTGTGCACATAAATATGTCAGTGAAGCCAAATAGGCACATTCGGATTTGATTGAAACCGTCTGGACTTGCGGTAGACAAACTAGCTCATGTTTCAAGTGTGTGAGGATTTAAATGTCCTGAATCGGATTTAAGTCCATCTCTGTCTGTCTAGCTATCTAGTGACCAATCTGATGGGAGCAGATCTTAACAACATTGTCAAGTTTCAAAGACTTTCAGACGAACACGTACAATTCCTCATCTATCAGCTTCTTCGGGGCCTTAAGTACATCCATTCAGCTGGACTGATACACAGAGACTTAAAGCCAAGCAATGTAGCCGTGAATGAAGATTGTGAACTTAGGATCCTCGATTTTGGGTTGGCCAGACAAACAGATGATGAGATGACGGGCTATGTGGCGACTCGTTGGTACAGAGCACCAGAGATCATGCTTAACTGGATGCATTACAACCAGACAGTGGATATCTGGTCTGTCGGATGCATCATGGGTGAGCTTCTGAAGGGGAAGGTTTTGTTTCCTGGCAACGATTATATAGATCAGCTAAAGAGAATCATGGAGGTTGTAGGCACTCCAACCCCGGACGTATTGAAGAAGATATCTTCCGAACACGCTCAGAAGTACATCCAGTCTCTTCCGCACATGCCGCAGCAGGACCTGGGGAAGATATTTAGAGGGGCAAATCCACTGGCGGTTgatctgttgaaaaaaatgctGGTATTAGACTGTGATGGACGGATTTCCGCCAGTGAAGCGCTGTGCCATCCATACTTTTCCCAGTACCATGATCCAGAAGATGAACCAGAGGCACCTCCATACGATCAGACCCCTGAGAGCAAGGATCGCACAATGGAGGAGTGGAAGGAGCTAGTGTTTGAGGAAGTAAGCAATTTCAAAGATCCTCCCAATAAACCCGAAAGTCTTCAGGTTGAACAATAA
>TCONS_00053339
TTATTGGACTGCTGGACGTTTTCACTCCGGCAGCTTCTCTCGAGGAATTCAATGAGGTGTGAGTGTCTGCCTGGTGACAATATCTGTGCACATAAATATGTCAGTGAAGCCAAATAGGCACATTCGGATTTGATTGAAACCGTCTGGACTTGCGGTAGACAAACTAGCTCATGTTTCAAGTGTGTGAGGATTTAAATGTCCTGAATCGGATTTAAGTCCATCTCTGTCTGTCTAGCTATCTAGTGACCAATCTGATGGGAGCAGATCTTAACAACATTGTCAAGTTTCAAAGACTTTCAGACGAACACGTACAATTCCTCATCTATCAGCTTCTTCGGGGCCTTAAGTACATCCATTCAGCTGGACTGATACACAGAGACTTAAAGCCAAGCAATGTAGCCGTGAATGAAGATTGTGAACTTAGGATCCTCGATTTTGGGTTGGCCAGACAAACAGATGATGAGATGACGGGCTATGTGGCGACTCGTTGGTACAGAGCACCAGAGATCATGCTTAACTGGATGCATTACAACCAGACAGTGGATATCTGGTCTGTCGGATGCATCATGGGTGAGCTTCTGAAGGGGAAGGTTTTGTTTCCTGGCAACGATTATATAGATCAGCTAAAGAGAATCATGGAGGTTGTAGGCACTCCAACCCCGGACGTATTGAAGAAGATATCTTCCGAACACGCTCAGAAGTACATCCAGTCTCTTCCGCACATGCCGCAGCAGGACCTGGGGAAGATATTTAGAGGGGCAAATCCACTGGCGGTTgatctgttgaaaaaaatgctGGTATTAGACTGTGATGGACGGATTTCCGCCAGTGAAGCGCTGTGCCATCCATACTTTTCCCAGTACCATGATCCAGAAGATGAACCAGAGGCACCTCCATACGA

Function

symbol description
mapk11 Predicted to enable MAP kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in granule cell. Orthologous to human MAPK11 (mitogen-activated protein kinase 11).

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0044085 cellular component biogenesis biological_process
GO:0030099 myeloid cell differentiation biological_process
GO:0048731 system development biological_process
GO:0002520 immune system development biological_process
GO:0002262 myeloid cell homeostasis biological_process
GO:0000027 ribosomal large subunit assembly biological_process
GO:0000028 ribosomal small subunit assembly biological_process
GO:0071826 ribonucleoprotein complex subunit organization biological_process
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0022618 ribonucleoprotein complex assembly biological_process
GO:0008152 metabolic process biological_process
GO:0043009 chordate embryonic development biological_process
GO:0051726 regulation of cell cycle biological_process
GO:0019538 protein metabolic process biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0048513 animal organ development biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:0048534 hematopoietic or lymphoid organ development biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0007275 multicellular organism development biological_process
GO:0006412 translation biological_process
GO:0006414 translational elongation biological_process
GO:0030218 erythrocyte differentiation biological_process
GO:0048856 anatomical structure development biological_process
GO:0010467 gene expression biological_process
GO:0044237 cellular metabolic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0010468 regulation of gene expression biological_process
GO:0044238 primary metabolic process biological_process
GO:0048872 homeostasis of number of cells biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0042255 ribosome assembly biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0000470 maturation of LSU-rRNA biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0042273 ribosomal large subunit biogenesis biological_process
GO:0042274 ribosomal small subunit biogenesis biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0070925 organelle assembly biological_process
GO:0006518 peptide metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0009987 cellular process biological_process
GO:0034622 cellular protein-containing complex assembly biological_process
GO:0006807 nitrogen compound metabolic process biological_process
GO:0034101 erythrocyte homeostasis biological_process
GO:0032501 multicellular organismal process biological_process
GO:0002181 cytoplasmic translation biological_process
GO:0032502 developmental process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process
GO:0009790 embryo development biological_process
GO:0009792 embryo development ending in birth or egg hatching biological_process
GO:0044391 ribosomal subunit cellular_component
GO:0044422 obsolete organelle part cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:1990904 ribonucleoprotein complex cellular_component
GO:0022625 cytosolic large ribosomal subunit cellular_component
GO:0022626 cytosolic ribosome cellular_component
GO:0022627 cytosolic small ribosomal subunit cellular_component
GO:0044444 obsolete cytoplasmic part cellular_component
GO:0044445 obsolete cytosolic part cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0044464 obsolete cell part cellular_component
GO:0005829 cytosol cellular_component
GO:0005840 ribosome cellular_component
GO:1905368 peptidase complex cellular_component
GO:1905369 endopeptidase complex cellular_component
GO:0032991 protein-containing complex cellular_component
GO:0015934 large ribosomal subunit cellular_component
GO:0015935 small ribosomal subunit cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005623 obsolete cell cellular_component
GO:0005634 nucleus cellular_component
GO:0000502 proteasome complex cellular_component
GO:0043226 organelle cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0019843 rRNA binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0005198 structural molecule activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003735 structural constituent of ribosome molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040625-75 Predicted to enable MAP kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in granule cell. Orthologous to human MAPK11 (mitogen-activated protein kinase 11).

Ensembl:

ensembl_id ENSDARG00000045836

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053335 False 559 lncRNA 0.44 2 5506946 5513391
TCONS_00053336 False 562 nonsense_mediated_decay 0.48 5 5506952 5515862
TCONS_00053337 False 2129 mRNA 0.43 12 5506952 5522437
TCONS_00053338 False 1263 mRNA 0.47 11 5507058 5521500
TCONS_00053339 True 901 lncRNA 0.46 8 5515031 5519419

Neighbor

gene id symbol gene type direction distance location
XLOC_027051 si:dkey-14d8.20 coding upstream 12648 5392094 ~ 5494298 (+)
XLOC_027053 NA coding upstream 49998 5424860 ~ 5456948 (+)
XLOC_027052 BX324164.1 coding upstream 50888 5420906 ~ 5456058 (+)
XLOC_027054 NA coding upstream 59716 5445769 ~ 5447230 (+)
XLOC_027050 selenoo2 coding upstream 119468 5378338 ~ 5387478 (+)
XLOC_027056 mapk12b coding downstream 1253 5523690 ~ 5530441 (+)
XLOC_027057 si:dkey-14d8.6 coding downstream 9146 5531583 ~ 5533803 (+)
XLOC_027058 si:dkey-14d8.7 coding downstream 14664 5537101 ~ 5539842 (+)
XLOC_027059 mrps18a coding downstream 120259 5642696 ~ 5645166 (+)
XLOC_027060 pou3f2a coding downstream 219296 5741733 ~ 5744457 (+)
XLOC_027046 NA non-coding upstream 202274 5302949 ~ 5304672 (+)
XLOC_027036 NA non-coding upstream 540396 4963839 ~ 4966550 (+)
XLOC_027063 CU571169.1 non-coding downstream 302931 5825368 ~ 5826340 (+)
XLOC_027069 NA non-coding downstream 434966 5957403 ~ 5963871 (+)
XLOC_027071 NA non-coding downstream 893841 6416278 ~ 6508633 (+)
XLOC_027075 NA non-coding downstream 1155993 6678430 ~ 6695024 (+)
XLOC_027078 CR388190.2 non-coding downstream 1381112 6903549 ~ 6904239 (+)

Expression


Co-expression Network