G792159


Basic Information

Item Value
gene id G792159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 30629177 ~ 30629458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU901803
ggtgcacacagaaaacacatgaattacAGTTTCTTTCATTTGACAGAAAGGACACCCCTGCCCAATTCCCGGATCAAcccgtgccaaccagctgttagtggccagggctccatgaagaaccctccactggaggtcccctgacctctttggtactgggggtttgtagagccccctccatctaaaacccaccatactctccgccccacataccccctgccactgatgtgccttcactcctgttaggcttctaatgctcctaaccttaacgcagaggttgtagag

Function

NR:

description
Transposon TX1 hypothetical protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU901803 True 282 lncRNA 0.53 1 30629177 30629458

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 30830 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 342938 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 1155388 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 1247508 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 1288824 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 1123724 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 1270602 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 1373408 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 1448160 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 1482334 32111792 ~ 32114299 (+)
G792088 NA non-coding upstream 8223 30527278 ~ 30620954 (+)
G792062 NA non-coding upstream 132244 30496264 ~ 30496933 (+)
G791696 NA non-coding upstream 420735 30206731 ~ 30208442 (+)
G791596 NA non-coding upstream 546431 30082527 ~ 30082746 (+)
G791593 NA non-coding upstream 547526 30081410 ~ 30081651 (+)
G792160 NA non-coding downstream 3754 30633212 ~ 30633411 (+)
G792218 NA non-coding downstream 86966 30716424 ~ 30723661 (+)
G792223 NA non-coding downstream 97717 30727175 ~ 30727534 (+)
G792224 NA non-coding downstream 101131 30730589 ~ 30738457 (+)
G792614 NA non-coding downstream 169780 30799238 ~ 30840186 (+)
taf6l taf6l other upstream 3141654 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 3249513 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 4215645 26413112 ~ 26413532 (+)
G793757 LOC107579696 other downstream 966538 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 1493224 32122682 ~ 32124851 (+)
G794892 NA other downstream 1872389 32501847 ~ 32502355 (+)
G794893 NA other downstream 1872938 32502396 ~ 32502749 (+)

Expression


Co-expression Network