G793187


Basic Information

Item Value
gene id G793187
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31240019 ~ 31243078 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU902871
ggttacagatccagttgcggggtgttcatacaaatctttttaaagtgtgagGCAGAGCTCTGcaagatttctgtgattttctatgattttctgaaataacacacacatactaaaccctccgtaaataactcagttcttaacgtaaagacttaaaactcaggattatgtaaaggcataccccaatcaggatatgagtttatttatagcttcctgtgccaaccagaagtgccttaaattgtgtcatagtggctgtttccaagggttaaaaaggtcagatcttttcaaaacttcatgtgtgattaggcaacccccataaactgtaagtcagtcatttctcccaacagatgtcaaagaaaagctctcacacacacacacacagcaaggatggagtgataaagtgcggtgcttaaagacacagagagcaggcaatggcattaccataatccctaggccgtgccgagttcaacgatatatcccgcttgaccgtagctcgctcggtctaggcgcagcgaccattagaatagtaggcccaaaatgaagcctgccccacaatgtcatttgcttttgggtgacagtgaaagaaccgttagggtgagaagaaaaattccaccacaggaatgttcctaaggtcctcccgatctgtgcaagcctaaccttgactgtGTGGCGtcaacccttaacagtaaaaccgggttttttgatctcacagattacagtgacatctctccccataggaatacattgcctgcacccctaaattcaacctgaagcctatatgggttatgaatgccgtatgaacctgtcttcgataccagtccatcaggccactatgaggtctacctgtgttgattctaagcttcctggaccaaccggaagtggttcaaatgcccctaaaagtgtatatccataccctgcctgcagtttgacagacatagtgcattcaagcctgtgtaaatcagtcaattcttaacgtaaagacttaaaactcaggattctttAACAGCacaccccaatgaggatatgtgttgatttatagcttcctgtgccaaccggaagtgccataattggtgtctcaggggctgtttcgaagggttaaaacagtcagatctgtccaaaacttcatatatgtgattaggcaacccccatgaacggtaaatcagtcatttttccccaaaaaattcaaaggaaaaaaaaatcacactaaaacacaacttggaaggagggacgtattggggtgcgtagagacagacagtggctgcaatagttagctttgttcaagctaaaaaagaaccgtcatacctagagttccgaaactttagaaacctgttctagacctccggtcgatagtgcgtggtgagttacgtggctctagacggttctcggaccgagaaacagcctcgtacatttgcaataccttcaattcattttgaccatcacgaaaatgacgacgtttagaaaagtctcagagacgcaaggctaggtgcattgaaaccggctcggcccatagagacggaccccaacgtttctgtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU902871 True 1531 lncRNA 0.44 2 31240019 31243078

Neighbor

gene id symbol gene type direction distance location
LOC110531892 LOC106577482 coding upstream 641672 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 953780 30282637 ~ 30288163 (+)
stim2b LOC106577483 coding upstream 1766230 29383092 ~ 29473789 (+)
tbc1d19 tbc1d19 coding upstream 1858350 29354116 ~ 29381669 (+)
rbpjb LOC106577485 coding upstream 1899666 29248127 ~ 29342203 (+)
LOC110531915 LOC106595846 coding downstream 510104 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 656982 31900060 ~ 31992396 (+)
LOC110531918 LOC106577443 coding downstream 759788 32002866 ~ 32027214 (+)
LOC118965935 NA coding downstream 834540 32077618 ~ 32078723 (+)
LOC110531922 LOC106577451 coding downstream 868714 32111792 ~ 32114299 (+)
G793131 NA non-coding upstream 64387 31175341 ~ 31175632 (+)
G793011 NA non-coding upstream 102668 31087208 ~ 31137351 (+)
G792755 NA non-coding upstream 337503 30901882 ~ 30902516 (+)
G792741 NA non-coding upstream 345643 30894150 ~ 30894376 (+)
G792614 NA non-coding upstream 399833 30799238 ~ 30840186 (+)
G793274 NA non-coding downstream 23118 31266196 ~ 31266565 (+)
G793278 NA non-coding downstream 26242 31269320 ~ 31269655 (+)
G793281 NA non-coding downstream 28605 31271683 ~ 31272074 (+)
G793308 NA non-coding downstream 44506 31287584 ~ 31287825 (+)
G793320 NA non-coding downstream 51942 31295020 ~ 31295256 (+)
taf6l taf6l other upstream 3752496 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 3860355 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 4826487 26413112 ~ 26413532 (+)
G793757 LOC107579696 other downstream 352918 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 879604 32122682 ~ 32124851 (+)
G794892 NA other downstream 1258769 32501847 ~ 32502355 (+)
G794893 NA other downstream 1259318 32502396 ~ 32502749 (+)

Expression


Co-expression Network